STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIX11958.1Dihydrolipoamide dehydrogenase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (238 aa)    
Predicted Functional Partners:
KIX11957.1
Mercuric reductase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
     0.985
KIX14913.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.976
KIX11126.1
Catalytic domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.976
KIX14912.1
TPP-dependent acetoin dehydrogenase complex, E1 protein subunit beta; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.962
KIX11131.1
TPP-dependent acetoin dehydrogenase complex, E1 protein subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.962
KIX11127.1
Dihydrolipoamide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.951
KIX10758.1
Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.951
KIX11956.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
   
 0.918
KIX14914.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
      0.906
KIX11959.1
Radical SAM protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
   
 0.865
Your Current Organism:
Dethiosulfatarculus sandiegensis
NCBI taxonomy Id: 1429043
Other names: D. sandiegensis, DSM 100305, Deltaproteobacteria bacterium SPR, Desulfarculus sp. SPR, Dethiosulfatarculus sandiegensis Davidova et al. 2016, JCM 30857, strain SPR
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.