STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIX11393.12-oxoacid:ferredoxin oxidoreductase subunit gamma; Derived by automated computational analysis using gene prediction method: Protein Homology. (180 aa)    
Predicted Functional Partners:
KIX11394.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.999
KIX11395.1
2-ketoisovalerate ferredoxin reductase; Catalyzes the coenzyme A-dependent oxidation of 3-methyl-2-oxobutanoate coupled to the reduction of ferredoxin producing S-(2-methylpropanoyl)-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.991
KIX15112.1
2-oxoglutarate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.987
KIX15606.1
2-oxoacid ferredoxin oxidoreductase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.985
KIX13320.1
2-oxoglutarate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.984
KIX11396.1
Tungsten formylmethanofuran dehydrogenase subunit G; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.980
KIX15111.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.943
KIX14141.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.897
KIX13319.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.897
KIX13321.1
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.896
Your Current Organism:
Dethiosulfatarculus sandiegensis
NCBI taxonomy Id: 1429043
Other names: D. sandiegensis, DSM 100305, Deltaproteobacteria bacterium SPR, Desulfarculus sp. SPR, Dethiosulfatarculus sandiegensis Davidova et al. 2016, JCM 30857, strain SPR
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.