STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001885685_00980Unannotated protein. (99 aa)    
Predicted Functional Partners:
GCA_001885685_00752
Unannotated protein.
  
     0.750
GCA_001885685_01282
Unannotated protein.
  
     0.719
GCA_001885685_00008
Unannotated protein.
  
   
 0.711
GCA_001885685_03081
Unannotated protein.
  
     0.693
GCA_001885685_03068
Unannotated protein.
  
     0.690
GCA_001885685_01965
Unannotated protein.
  
     0.681
GCA_001885685_00979
Unannotated protein.
 
     0.655
GCA_001885685_02621
Unannotated protein.
  
     0.653
GCA_001885685_00978
Unannotated protein.
 
     0.630
GCA_001885685_01338
Unannotated protein.
  
     0.625
Your Current Organism:
Pseudomonas hussainii
NCBI taxonomy Id: 1429083
Other names: BCRC 80696, JCM 19513, P. hussainii, Pseudomonas hussainii Hameed et al. 2014, Pseudomonas sp. CC-AMH-11, Pseudomonas sp. CC-AMHZ-5, strain CC-AMH-11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.