STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001885685_01300Unannotated protein. (457 aa)    
Predicted Functional Partners:
GCA_001885685_01924
Unannotated protein.
 
 0.981
GCA_001885685_01299
Unannotated protein.
 
 0.975
GCA_001885685_01722
Unannotated protein.
 0.964
GCA_001885685_02200
Unannotated protein.
 
 0.963
GCA_001885685_02149
Unannotated protein.
 0.957
GCA_001885685_00612
Unannotated protein.
 0.944
GCA_001885685_01922
Unannotated protein.
 
 0.943
GCA_001885685_02282
Unannotated protein.
 
 0.941
GCA_001885685_00181
Unannotated protein.
  
 0.933
GCA_001885685_01355
Unannotated protein; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.
   
 
  0.921
Your Current Organism:
Pseudomonas hussainii
NCBI taxonomy Id: 1429083
Other names: BCRC 80696, JCM 19513, P. hussainii, Pseudomonas hussainii Hameed et al. 2014, Pseudomonas sp. CC-AMH-11, Pseudomonas sp. CC-AMHZ-5, strain CC-AMH-11
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.