Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A0G4NTI9 | A0A0G4P963 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.499 |
A0A0G4NTI9 | A0A0G4PHJ0 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Cytochrome b5. | 0.499 |
A0A0G4NTI9 | A0A0G4PIS5 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Cytochrome P450; Belongs to the cytochrome P450 family. | 0.639 |
A0A0G4NTI9 | A0A0G4PJ79 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Adrenodoxin. | 0.940 |
A0A0G4P102 | A0A0G4PCQ4 | Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. | Aromatic-ring hydroxylase-like. | 0.832 |
A0A0G4P102 | A0A0G4PIS5 | Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. | Cytochrome P450; Belongs to the cytochrome P450 family. | 0.547 |
A0A0G4P102 | A0A0G4PXH6 | Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. | Aromatic-ring hydroxylase-like. | 0.971 |
A0A0G4P963 | A0A0G4NTI9 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.499 |
A0A0G4P963 | A0A0G4PCQ4 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Aromatic-ring hydroxylase-like. | 0.589 |
A0A0G4P963 | A0A0G4PHJ0 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Cytochrome b5. | 0.978 |
A0A0G4P963 | A0A0G4PIS5 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Cytochrome P450; Belongs to the cytochrome P450 family. | 0.705 |
A0A0G4P963 | A0A0G4PJ79 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Adrenodoxin. | 0.949 |
A0A0G4P963 | A0A0G4PXH6 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Aromatic-ring hydroxylase-like. | 0.589 |
A0A0G4PCQ4 | A0A0G4P102 | Aromatic-ring hydroxylase-like. | Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. | 0.832 |
A0A0G4PCQ4 | A0A0G4P963 | Aromatic-ring hydroxylase-like. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.589 |
A0A0G4PCQ4 | A0A0G4PHJ0 | Aromatic-ring hydroxylase-like. | Cytochrome b5. | 0.589 |
A0A0G4PCQ4 | A0A0G4PIS5 | Aromatic-ring hydroxylase-like. | Cytochrome P450; Belongs to the cytochrome P450 family. | 0.548 |
A0A0G4PCQ4 | A0A0G4PJ79 | Aromatic-ring hydroxylase-like. | Adrenodoxin. | 0.537 |
A0A0G4PCQ4 | A0A0G4PJB9 | Aromatic-ring hydroxylase-like. | Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. | 0.832 |
A0A0G4PCQ4 | A0A0G4PTQ2 | Aromatic-ring hydroxylase-like. | Squalene cyclase. | 0.832 |
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