STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ETR79372.1Arsenate reductase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (141 aa)    
Predicted Functional Partners:
ETR75796.1
DSBA oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.952
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.924
rpoC
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.878
ETR79370.1
ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
   
 0.852
ETR79371.1
ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
 
  
 0.850
ETR79373.1
Arsenic transporter; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
     
 0.820
rpoH
RNA polymerase sigma 70; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes.
    
   0.808
rpoD
RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.
    
   0.808
ETR79374.1
ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
     
 0.661
ETR79369.1
MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
     
 0.611
Your Current Organism:
Afipia sp. P5210
NCBI taxonomy Id: 1429916
Other names: A. sp. P52-10, Afipia sp. P52-10
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