STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSC43216.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (574 aa)    
Predicted Functional Partners:
OSC43215.1
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
OSC40198.1
Stage II sporulation protein E; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.998
OSC43214.1
Universal stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.961
OSC39598.1
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.947
OSC37210.1
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.933
OSC40547.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.917
OSC38738.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.912
OSC43308.1
LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.908
OSC41144.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.900
OSC41179.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.900
Your Current Organism:
Mycobacterium decipiens
NCBI taxonomy Id: 1430326
Other names: ATCC TSD-117, DSM 105360, M. decipiens, Mycobacterium sp. TBL 1200985, strain TBL 1200985
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.