STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSC40184.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (53 aa)    
Predicted Functional Partners:
OSC40183.1
LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.843
OSC40182.1
MBL fold metallo-hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.841
OSC36489.1
DUF3117 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.771
OSC40185.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.723
OSC40186.1
Anion transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.723
OSC40240.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.467
OSC39468.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.448
OSC40620.1
Nucleoid-associated protein Lsr2; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.438
Your Current Organism:
Mycobacterium decipiens
NCBI taxonomy Id: 1430326
Other names: ATCC TSD-117, DSM 105360, M. decipiens, Mycobacterium sp. TBL 1200985, strain TBL 1200985
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.