STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDL00671.1Homologs of previously reported genes of unknown function. (428 aa)    
Predicted Functional Partners:
manC
Mannose-1-phosphate guanyltransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.854
wecB
UDP-N-acetylglucosamine 2-epimerase; Function of strongly homologous gene; putative enzyme; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
     
 0.795
CDL00674.1
Putative UDP-N-acetylmuramyl pentapeptide phosphotransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
 0.720
CDL00125.1
Putative Glycosyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
 0.652
CDL00673.1
Putative Threonine dehydrogenase and related Zn-dependent dehydrogenases; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
     
 0.630
CDK97822.1
Putative succinoglycan biosynthesis transport protein exoP; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
  
 0.615
CDK97816.1
Putative exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
 0.571
CDL01424.1
Putative TPR repeat-containing protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier.
  
  
 0.571
capD
Capsular polysaccharide biosynthesis protein; Function of strongly homologous gene; enzyme.
 
  
 0.557
galE
UDP-glucose 4-epimerase; Function of strongly homologous gene; enzyme.
     
 0.554
Your Current Organism:
Magnetospirillum gryphiswaldense
NCBI taxonomy Id: 1430440
Other names: M. gryphiswaldense MSR-1 v2, Magnetospirillum gryphiswaldense MSR-1 v2, Magnetospirillum gryphiswaldense str. MSR-1 v2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.