STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001469165_00277Unannotated protein. (414 aa)    
Predicted Functional Partners:
GCA_001469165_03022
Unannotated protein.
  
   
 0.792
GCA_001469165_00559
Unannotated protein.
  
   
 0.788
GCA_001469165_03021
Unannotated protein.
  
   
 0.786
GCA_001469165_04328
Unannotated protein.
  
  
 0.765
GCA_001469165_00278
Unannotated protein.
 
   
0.560
GCA_001469165_04324
Unannotated protein.
  
   
 0.494
GCA_001469165_02298
Unannotated protein.
  
    0.482
GCA_001469165_04325
Unannotated protein.
  
   
 0.480
GCA_001469165_04327
Unannotated protein.
  
  
 0.480
GCA_001469165_04326
Unannotated protein.
  
  
 0.479
Your Current Organism:
Thiohalocapsa sp. ML1
NCBI taxonomy Id: 1431688
Other names: Amoebobacter purpurea ML1, Chromatiaceae bacterium ML1, Lamprocystis purpurea ML1, T. sp. ML1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.