STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001469165_04335Unannotated protein. (321 aa)    
Predicted Functional Partners:
GCA_001469165_03800
Unannotated protein.
    
   0.854
GCA_001469165_04729
Unannotated protein.
  
  
0.854
GCA_001469165_04075
Unannotated protein.
  
    0.703
GCA_001469165_04334
Unannotated protein.
       0.701
GCA_001469165_00601
Unannotated protein.
   
   0.646
GCA_001469165_02277
Unannotated protein.
      0.639
GCA_001469165_02299
Unannotated protein.
      0.595
GCA_001469165_01872
Unannotated protein.
  
    0.537
GCA_001469165_03952
Unannotated protein.
    
   0.513
GCA_001469165_04336
Unannotated protein.
       0.462
Your Current Organism:
Thiohalocapsa sp. ML1
NCBI taxonomy Id: 1431688
Other names: Amoebobacter purpurea ML1, Chromatiaceae bacterium ML1, Lamprocystis purpurea ML1, T. sp. ML1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.