STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001469165_04404Unannotated protein. (154 aa)    
Predicted Functional Partners:
GCA_001469165_04405
Unannotated protein.
 0.999
GCA_001469165_03053
Unannotated protein.
 0.997
GCA_001469165_04406
Unannotated protein.
 
 
 0.973
GCA_001469165_01586
Unannotated protein.
 
 
 0.894
GCA_001469165_01830
Unannotated protein.
    
 0.729
GCA_001469165_00108
Unannotated protein.
    
  0.671
GCA_001469165_03967
Unannotated protein.
    
 0.641
GCA_001469165_01629
Unannotated protein.
 
 
 0.596
GCA_001469165_01208
Unannotated protein.
  
 
 0.554
GCA_001469165_03492
Unannotated protein.
    
 0.554
Your Current Organism:
Thiohalocapsa sp. ML1
NCBI taxonomy Id: 1431688
Other names: Amoebobacter purpurea ML1, Chromatiaceae bacterium ML1, Lamprocystis purpurea ML1, T. sp. ML1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.