STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RirG_109130Tbf1p. (207 aa)    
Predicted Functional Partners:
RirG_210440
VEFS-Box domain-containing protein.
    
 0.636
RirG_043810
Rph1p.
   
 0.609
RirG_081790
Swd1p.
    
 0.595
RirG_013490
Bre2p.
    
 0.595
RirG_042090
Chromo domain-containing protein.
    
 0.568
RirG_151930
Histone H2B; Belongs to the histone H2B family.
    
 0.567
RirG_034180
Galactose-1-phosphate uridylyltransferase; Belongs to the galactose-1-phosphate uridylyltransferase type 1 family.
    
  0.556
RirG_079530
Histone H2A; Belongs to the histone H2A family.
    
 0.551
RirG_012610
Sec22p.
    
 0.547
RirG_067560
Histone-lysine N-methyltransferase, H3 lysine-79 specific.
    
 0.544
Your Current Organism:
Rhizophagus irregularis DAOM
NCBI taxonomy Id: 1432141
Other names: R. irregularis DAOM 197198w, Rhizophagus irregularis DAOM 197198w, Rhizophagus irregularis DAOM197198w
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.