Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RirG_005190 | RirG_028340 | A0A015NJ69 | A0A015NCJ5 | Uncharacterized protein; Belongs to the complex I LYR family. | L51_S25_CI-B8 domain-containing protein. | 0.999 |
RirG_005190 | RirG_039590 | A0A015NJ69 | A0A015K1R8 | Uncharacterized protein; Belongs to the complex I LYR family. | Uncharacterized protein. | 0.994 |
RirG_005190 | RirG_039970 | A0A015NJ69 | A0A015K7Z9 | Uncharacterized protein; Belongs to the complex I LYR family. | Cytochrome c oxidase subunit IV. | 0.975 |
RirG_005190 | RirG_049620 | A0A015NJ69 | A0A015JYJ0 | Uncharacterized protein; Belongs to the complex I LYR family. | COX2_CUA domain-containing protein. | 0.761 |
RirG_005190 | RirG_061830 | A0A015NJ69 | A0A015JUJ8 | Uncharacterized protein; Belongs to the complex I LYR family. | Uncharacterized protein. | 0.987 |
RirG_005190 | RirG_089100 | A0A015NJ69 | A0A015JSJ4 | Uncharacterized protein; Belongs to the complex I LYR family. | Cytochrome c oxidase subunit VI. | 0.988 |
RirG_005190 | RirG_112630 | A0A015NJ69 | A0A015JDZ8 | Uncharacterized protein; Belongs to the complex I LYR family. | Uncharacterized protein. | 0.999 |
RirG_005190 | RirG_126800 | A0A015NJ69 | A0A015KFF4 | Uncharacterized protein; Belongs to the complex I LYR family. | Cytochrome c oxidase subunit Va. | 0.940 |
RirG_005190 | RirG_195550 | A0A015NJ69 | A0A015IWM1 | Uncharacterized protein; Belongs to the complex I LYR family. | Uncharacterized protein; Belongs to the complex I LYR family. | 0.999 |
RirG_005190 | RirG_237630 | A0A015NJ69 | A0A015K3X1 | Uncharacterized protein; Belongs to the complex I LYR family. | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. | 0.999 |
RirG_028340 | RirG_005190 | A0A015NCJ5 | A0A015NJ69 | L51_S25_CI-B8 domain-containing protein. | Uncharacterized protein; Belongs to the complex I LYR family. | 0.999 |
RirG_028340 | RirG_039590 | A0A015NCJ5 | A0A015K1R8 | L51_S25_CI-B8 domain-containing protein. | Uncharacterized protein. | 0.991 |
RirG_028340 | RirG_039970 | A0A015NCJ5 | A0A015K7Z9 | L51_S25_CI-B8 domain-containing protein. | Cytochrome c oxidase subunit IV. | 0.995 |
RirG_028340 | RirG_049620 | A0A015NCJ5 | A0A015JYJ0 | L51_S25_CI-B8 domain-containing protein. | COX2_CUA domain-containing protein. | 0.747 |
RirG_028340 | RirG_061830 | A0A015NCJ5 | A0A015JUJ8 | L51_S25_CI-B8 domain-containing protein. | Uncharacterized protein. | 0.989 |
RirG_028340 | RirG_089100 | A0A015NCJ5 | A0A015JSJ4 | L51_S25_CI-B8 domain-containing protein. | Cytochrome c oxidase subunit VI. | 0.976 |
RirG_028340 | RirG_112630 | A0A015NCJ5 | A0A015JDZ8 | L51_S25_CI-B8 domain-containing protein. | Uncharacterized protein. | 0.999 |
RirG_028340 | RirG_126800 | A0A015NCJ5 | A0A015KFF4 | L51_S25_CI-B8 domain-containing protein. | Cytochrome c oxidase subunit Va. | 0.964 |
RirG_028340 | RirG_195550 | A0A015NCJ5 | A0A015IWM1 | L51_S25_CI-B8 domain-containing protein. | Uncharacterized protein; Belongs to the complex I LYR family. | 0.999 |
RirG_028340 | RirG_237630 | A0A015NCJ5 | A0A015K3X1 | L51_S25_CI-B8 domain-containing protein. | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. | 0.999 |
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