Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHM35717.1 | SHM35740.1 | SAMN05878281_0407 | SAMN05878281_0408 | AsmA-like C-terminal region. | Hypothetical protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily. | 0.713 |
SHM35717.1 | SHM35771.1 | SAMN05878281_0407 | SAMN05878281_0409 | AsmA-like C-terminal region. | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridinediphosphokinase. | 0.496 |
SHM35717.1 | SHM50397.1 | SAMN05878281_0407 | SAMN05878281_0897 | AsmA-like C-terminal region. | Hypothetical protein. | 0.591 |
SHM35717.1 | SHM50819.1 | SAMN05878281_0407 | SAMN05878281_0911 | AsmA-like C-terminal region. | CarboxypepD_reg-like domain-containing protein. | 0.524 |
SHM35717.1 | SHM53036.1 | SAMN05878281_0407 | SAMN05878281_0995 | AsmA-like C-terminal region. | Protein of unknown function. | 0.515 |
SHM35717.1 | SHM65355.1 | SAMN05878281_0407 | SAMN05878281_1453 | AsmA-like C-terminal region. | Outer membrane receptor for ferrienterochelin and colicins; Manually curated. | 0.478 |
SHM35717.1 | SHM66195.1 | SAMN05878281_0407 | SAMN05878281_1495 | AsmA-like C-terminal region. | Hypothetical protein. | 0.647 |
SHM35717.1 | SHM83815.1 | SAMN05878281_0407 | SAMN05878281_2196 | AsmA-like C-terminal region. | Tryptophan 2,3-dioxygenase apoenzyme. | 0.479 |
SHM35717.1 | SHM99214.1 | SAMN05878281_0407 | SAMN05878281_2914 | AsmA-like C-terminal region. | Tetratricopeptide repeat-containing protein. | 0.522 |
SHM35717.1 | SHN03728.1 | SAMN05878281_0407 | SAMN05878281_3197 | AsmA-like C-terminal region. | Hypothetical protein. | 0.480 |
SHM35740.1 | SHM35717.1 | SAMN05878281_0408 | SAMN05878281_0407 | Hypothetical protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily. | AsmA-like C-terminal region. | 0.713 |
SHM35740.1 | SHM35771.1 | SAMN05878281_0408 | SAMN05878281_0409 | Hypothetical protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily. | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridinediphosphokinase. | 0.595 |
SHM35771.1 | SHM35717.1 | SAMN05878281_0409 | SAMN05878281_0407 | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridinediphosphokinase. | AsmA-like C-terminal region. | 0.496 |
SHM35771.1 | SHM35740.1 | SAMN05878281_0409 | SAMN05878281_0408 | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridinediphosphokinase. | Hypothetical protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily. | 0.595 |
SHM50397.1 | SHM35717.1 | SAMN05878281_0897 | SAMN05878281_0407 | Hypothetical protein. | AsmA-like C-terminal region. | 0.591 |
SHM50397.1 | SHM50819.1 | SAMN05878281_0897 | SAMN05878281_0911 | Hypothetical protein. | CarboxypepD_reg-like domain-containing protein. | 0.694 |
SHM50397.1 | SHM53036.1 | SAMN05878281_0897 | SAMN05878281_0995 | Hypothetical protein. | Protein of unknown function. | 0.647 |
SHM50397.1 | SHM66195.1 | SAMN05878281_0897 | SAMN05878281_1495 | Hypothetical protein. | Hypothetical protein. | 0.441 |
SHM50397.1 | SHM99214.1 | SAMN05878281_0897 | SAMN05878281_2914 | Hypothetical protein. | Tetratricopeptide repeat-containing protein. | 0.626 |
SHM50397.1 | SHN03728.1 | SAMN05878281_0897 | SAMN05878281_3197 | Hypothetical protein. | Hypothetical protein. | 0.729 |
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