STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM35717.1AsmA-like C-terminal region. (893 aa)    
Predicted Functional Partners:
SHM35740.1
Hypothetical protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily.
 
     0.713
SHM66195.1
Hypothetical protein.
  
     0.647
SHM50397.1
Hypothetical protein.
  
     0.591
SHM50819.1
CarboxypepD_reg-like domain-containing protein.
  
     0.524
SHM99214.1
Tetratricopeptide repeat-containing protein.
  
     0.522
SHM53036.1
Protein of unknown function.
  
     0.515
SHM35771.1
2-amino-4-hydroxy-6- hydroxymethyldihydropteridinediphosphokinase.
       0.496
SHN03728.1
Hypothetical protein.
  
     0.480
SHM83815.1
Tryptophan 2,3-dioxygenase apoenzyme.
  
     0.479
SHM65355.1
Outer membrane receptor for ferrienterochelin and colicins; Manually curated.
  
     0.478
Your Current Organism:
Salegentibacter salegens
NCBI taxonomy Id: 143223
Other names: ACAM 48, ATCC 51522, CCUG 33447, CIP 104041, DSM 5424, Flavobacterium salegens, LMG 13193, LMG:13193, S. salegens
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