STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM62724.1Aspartate racemase; Belongs to the aspartate/glutamate racemases family. (229 aa)    
Predicted Functional Partners:
pyrB
Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
     
 0.840
SHM82137.1
L-asparaginase.
    
 0.837
SHN02189.1
Asparagine synthase (glutamine-hydrolysing).
    
 0.758
SHM62692.1
Heavy-metal-associated domain-containing protein.
       0.705
SHM35274.1
Asparagine synthase (glutamine-hydrolysing).
    
 0.699
SHM83205.1
Asparagine synthase (glutamine-hydrolysing).
    
 0.699
SHN03984.1
Asparagine synthase (glutamine-hydrolysing).
    
 0.699
SHM86595.1
Amidophosphoribosyltransferase.
   
 
  0.697
purK
5-(carboxyamino)imidazole ribonucleotide synthase; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR).
  
    0.659
purE
5-(carboxyamino)imidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).
  
   0.642
Your Current Organism:
Salegentibacter salegens
NCBI taxonomy Id: 143223
Other names: ACAM 48, ATCC 51522, CCUG 33447, CIP 104041, DSM 5424, Flavobacterium salegens, LMG 13193, LMG:13193, S. salegens
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.