STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM68025.1Putative beta-lactamase-inhibitor-like, PepSY-like. (143 aa)    
Predicted Functional Partners:
SHM67960.1
Signal transduction histidine kinase.
 
  
 0.749
SHM67985.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 
  
 0.621
ribB
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
   
   0.510
SHM84502.1
Uncharacterized membrane protein.
  
     0.425
SHM68009.1
Phosphate-selective porin O and P.
       0.424
hisB
Imidazoleglycerol-phosphate dehydratase; In the C-terminal section; belongs to the imidazoleglycerol-phosphate dehydratase family.
    
   0.422
SHM87330.1
Protein of unknown function.
  
     0.416
SHM67940.1
Putative beta-lactamase-inhibitor-like, PepSY-like.
 
    0.411
SHM68054.1
Hypothetical protein.
       0.404
SHN03812.1
Four helix bundle sensory module for signal transduction.
  
     0.400
Your Current Organism:
Salegentibacter salegens
NCBI taxonomy Id: 143223
Other names: ACAM 48, ATCC 51522, CCUG 33447, CIP 104041, DSM 5424, Flavobacterium salegens, LMG 13193, LMG:13193, S. salegens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.