STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM81629.1Protein of unknown function. (200 aa)    
Predicted Functional Partners:
SHM93689.1
Hypothetical protein.
  
     0.768
SHM87405.1
Hypothetical protein.
  
     0.766
SHM94762.1
Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase.
  
     0.759
SHM77031.1
Putative MetA-pathway of phenol degradation.
  
     0.758
SHM43420.1
Hypothetical protein.
  
     0.757
SHM60465.1
HPt (histidine-containing phosphotransfer) domain-containing protein.
  
     0.757
SHM95176.1
Sporulation related domain-containing protein.
  
     0.755
SHM52000.1
Hypothetical protein.
  
     0.753
SHM51066.1
Protein of unknown function.
  
     0.750
SHN03013.1
Hypothetical protein.
  
     0.747
Your Current Organism:
Salegentibacter salegens
NCBI taxonomy Id: 143223
Other names: ACAM 48, ATCC 51522, CCUG 33447, CIP 104041, DSM 5424, Flavobacterium salegens, LMG 13193, LMG:13193, S. salegens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.