SHN07507.1 protein (Salegentibacter salegens)

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

SHN07507.1

RNA polymerase sigma-70 factor, ECF subfamily. (190 aa)

Predicted Functional Partners:

SHN07524.1

0.836

SHN07542.1

0.836

SHM54627.1

0.772

SHN06805.1

0.771

SHM34163.1

0.769

SHM55498.1

0.762

SHM68941.1

0.760

SHM57139.1

0.735

SHM56947.1

0.698

lipA

0.688

Your Current Organism:

Salegentibacter salegens

NCBI taxonomy Id: 143223
Other names: ACAM 48, ATCC 51522, CCUG 33447, CIP 104041, DSM 5424, Flavobacterium salegens, LMG 13193, LMG:13193, S. salegens

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SHM34163.1	SHM56947.1	SAMN05878281_0354	SAMN05878281_1128	RNA polymerase sigma-70 factor, ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.721
SHM34163.1	SHM57139.1	SAMN05878281_0354	SAMN05878281_1135	RNA polymerase sigma-70 factor, ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.735
SHM34163.1	SHN07507.1	SAMN05878281_0354	SAMN05878281_3452	RNA polymerase sigma-70 factor, ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.769
SHM54627.1	SHM56947.1	SAMN05878281_1054	SAMN05878281_1128	RNA polymerase sigma-70 factor, ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.656
SHM54627.1	SHM57139.1	SAMN05878281_1054	SAMN05878281_1135	RNA polymerase sigma-70 factor, ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.732
SHM54627.1	SHM68941.1	SAMN05878281_1054	SAMN05878281_1600	RNA polymerase sigma-70 factor, ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.769
SHM54627.1	SHN07507.1	SAMN05878281_1054	SAMN05878281_3452	RNA polymerase sigma-70 factor, ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.772
SHM55498.1	SHN07507.1	SAMN05878281_1083	SAMN05878281_3452	RNA polymerase sigma-70 factor, ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.762
SHM56947.1	SHM34163.1	SAMN05878281_1128	SAMN05878281_0354	RNA polymerase sigma-70 factor, ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.721
SHM56947.1	SHM54627.1	SAMN05878281_1128	SAMN05878281_1054	RNA polymerase sigma-70 factor, ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.656
SHM56947.1	SHM57139.1	SAMN05878281_1128	SAMN05878281_1135	RNA polymerase sigma-70 factor, ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.534
SHM56947.1	SHN06805.1	SAMN05878281_1128	SAMN05878281_3403	RNA polymerase sigma-70 factor, ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.697
SHM56947.1	SHN07507.1	SAMN05878281_1128	SAMN05878281_3452	RNA polymerase sigma-70 factor, ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.698
SHM57139.1	SHM34163.1	SAMN05878281_1135	SAMN05878281_0354	RNA polymerase sigma-70 factor, ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.735
SHM57139.1	SHM54627.1	SAMN05878281_1135	SAMN05878281_1054	RNA polymerase sigma-70 factor, ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.732
SHM57139.1	SHM56947.1	SAMN05878281_1135	SAMN05878281_1128	RNA polymerase sigma-70 factor, ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.534
SHM57139.1	SHM68941.1	SAMN05878281_1135	SAMN05878281_1600	RNA polymerase sigma-70 factor, ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.730
SHM57139.1	SHN06805.1	SAMN05878281_1135	SAMN05878281_3403	RNA polymerase sigma-70 factor, ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.714
SHM57139.1	SHN07507.1	SAMN05878281_1135	SAMN05878281_3452	RNA polymerase sigma-70 factor, ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.735
SHM68941.1	SHM54627.1	SAMN05878281_1600	SAMN05878281_1054	RNA polymerase sigma-70 factor, ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.769