Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIS37773.1 | SIS38554.1 | SAMN05421766_101182 | SAMN05421766_101299 | T/G mismatch-specific endonuclease; May nick specific sequences that contain T:G mispairs resulting from m5C-deamination. | DNA (cytosine-5)-methyltransferase 1. | 0.739 |
SIS38547.1 | SIS38554.1 | SAMN05421766_101298 | SAMN05421766_101299 | Hypothetical protein. | DNA (cytosine-5)-methyltransferase 1. | 0.693 |
SIS38547.1 | SIS38562.1 | SAMN05421766_101298 | SAMN05421766_101300 | Hypothetical protein. | SH3 domain-containing protein. | 0.488 |
SIS38554.1 | SIS37773.1 | SAMN05421766_101299 | SAMN05421766_101182 | DNA (cytosine-5)-methyltransferase 1. | T/G mismatch-specific endonuclease; May nick specific sequences that contain T:G mispairs resulting from m5C-deamination. | 0.739 |
SIS38554.1 | SIS38547.1 | SAMN05421766_101299 | SAMN05421766_101298 | DNA (cytosine-5)-methyltransferase 1. | Hypothetical protein. | 0.693 |
SIS38554.1 | SIS38562.1 | SAMN05421766_101299 | SAMN05421766_101300 | DNA (cytosine-5)-methyltransferase 1. | SH3 domain-containing protein. | 0.556 |
SIS38554.1 | SIS39270.1 | SAMN05421766_101299 | SAMN05421766_101417 | DNA (cytosine-5)-methyltransferase 1. | Collagen triple helix repeat-containing protein. | 0.413 |
SIS38554.1 | SIS47878.1 | SAMN05421766_101299 | SAMN05421766_102182 | DNA (cytosine-5)-methyltransferase 1. | Collagen triple helix repeat-containing protein. | 0.471 |
SIS38554.1 | SIS51216.1 | SAMN05421766_101299 | SAMN05421766_102497 | DNA (cytosine-5)-methyltransferase 1. | O-Antigen ligase. | 0.411 |
SIS38554.1 | SIS54362.1 | SAMN05421766_101299 | SAMN05421766_102649 | DNA (cytosine-5)-methyltransferase 1. | Type I restriction enzyme, S subunit. | 0.420 |
SIS38554.1 | SIS81449.1 | SAMN05421766_101299 | SAMN05421766_104108 | DNA (cytosine-5)-methyltransferase 1. | Inner membrane protein. | 0.508 |
SIS38554.1 | ahcY | SAMN05421766_101299 | SAMN05421766_101615 | DNA (cytosine-5)-methyltransferase 1. | Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. | 0.764 |
SIS38554.1 | metK | SAMN05421766_101299 | SAMN05421766_10514 | DNA (cytosine-5)-methyltransferase 1. | Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | 0.797 |
SIS38562.1 | SIS38547.1 | SAMN05421766_101300 | SAMN05421766_101298 | SH3 domain-containing protein. | Hypothetical protein. | 0.488 |
SIS38562.1 | SIS38554.1 | SAMN05421766_101300 | SAMN05421766_101299 | SH3 domain-containing protein. | DNA (cytosine-5)-methyltransferase 1. | 0.556 |
SIS39270.1 | SIS38554.1 | SAMN05421766_101417 | SAMN05421766_101299 | Collagen triple helix repeat-containing protein. | DNA (cytosine-5)-methyltransferase 1. | 0.413 |
SIS47878.1 | SIS38554.1 | SAMN05421766_102182 | SAMN05421766_101299 | Collagen triple helix repeat-containing protein. | DNA (cytosine-5)-methyltransferase 1. | 0.471 |
SIS51216.1 | SIS38554.1 | SAMN05421766_102497 | SAMN05421766_101299 | O-Antigen ligase. | DNA (cytosine-5)-methyltransferase 1. | 0.411 |
SIS54362.1 | SIS38554.1 | SAMN05421766_102649 | SAMN05421766_101299 | Type I restriction enzyme, S subunit. | DNA (cytosine-5)-methyltransferase 1. | 0.420 |
SIS81449.1 | SIS38554.1 | SAMN05421766_104108 | SAMN05421766_101299 | Inner membrane protein. | DNA (cytosine-5)-methyltransferase 1. | 0.508 |
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