Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIS39084.1 | SIS39754.1 | SAMN05421766_101386 | SAMN05421766_101491 | Amidophosphoribosyltransferase. | Membrane protein required for colicin V production. | 0.907 |
SIS39084.1 | SIS87779.1 | SAMN05421766_101386 | SAMN05421766_104569 | Amidophosphoribosyltransferase. | Phosphoribosylformylglycinamidine cyclo-ligase. | 0.984 |
SIS39084.1 | purC | SAMN05421766_101386 | SAMN05421766_102567 | Amidophosphoribosyltransferase. | Phosphoribosylaminoimidazole-succinocarboxamide synthase; Belongs to the SAICAR synthetase family. | 0.975 |
SIS39084.1 | purE | SAMN05421766_101386 | SAMN05421766_104266 | Amidophosphoribosyltransferase. | 5-(carboxyamino)imidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR). | 0.955 |
SIS39084.1 | purL | SAMN05421766_101386 | SAMN05421766_10383 | Amidophosphoribosyltransferase. | Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. | 0.999 |
SIS39084.1 | purN | SAMN05421766_101386 | SAMN05421766_101383 | Amidophosphoribosyltransferase. | Formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate. | 0.981 |
SIS39754.1 | SIS39084.1 | SAMN05421766_101491 | SAMN05421766_101386 | Membrane protein required for colicin V production. | Amidophosphoribosyltransferase. | 0.907 |
SIS39754.1 | SIS39762.1 | SAMN05421766_101491 | SAMN05421766_101492 | Membrane protein required for colicin V production. | Hypothetical protein. | 0.639 |
SIS39754.1 | SIS39996.1 | SAMN05421766_101491 | SAMN05421766_101526 | Membrane protein required for colicin V production. | Hypothetical protein. | 0.709 |
SIS39754.1 | SIS81905.1 | SAMN05421766_101491 | SAMN05421766_104143 | Membrane protein required for colicin V production. | Outer membrane protein beta-barrel domain-containing protein. | 0.728 |
SIS39754.1 | SIS87779.1 | SAMN05421766_101491 | SAMN05421766_104569 | Membrane protein required for colicin V production. | Phosphoribosylformylglycinamidine cyclo-ligase. | 0.824 |
SIS39754.1 | SIT10321.1 | SAMN05421766_101491 | SAMN05421766_11035 | Membrane protein required for colicin V production. | Cell division protein ZapA. | 0.644 |
SIS39754.1 | purC | SAMN05421766_101491 | SAMN05421766_102567 | Membrane protein required for colicin V production. | Phosphoribosylaminoimidazole-succinocarboxamide synthase; Belongs to the SAICAR synthetase family. | 0.823 |
SIS39754.1 | purE | SAMN05421766_101491 | SAMN05421766_104266 | Membrane protein required for colicin V production. | 5-(carboxyamino)imidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR). | 0.739 |
SIS39754.1 | purL | SAMN05421766_101491 | SAMN05421766_10383 | Membrane protein required for colicin V production. | Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. | 0.982 |
SIS39754.1 | purN | SAMN05421766_101491 | SAMN05421766_101383 | Membrane protein required for colicin V production. | Formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate. | 0.618 |
SIS39762.1 | SIS39754.1 | SAMN05421766_101492 | SAMN05421766_101491 | Hypothetical protein. | Membrane protein required for colicin V production. | 0.639 |
SIS39996.1 | SIS39754.1 | SAMN05421766_101526 | SAMN05421766_101491 | Hypothetical protein. | Membrane protein required for colicin V production. | 0.709 |
SIS39996.1 | SIS81905.1 | SAMN05421766_101526 | SAMN05421766_104143 | Hypothetical protein. | Outer membrane protein beta-barrel domain-containing protein. | 0.645 |
SIS81905.1 | SIS39754.1 | SAMN05421766_104143 | SAMN05421766_101491 | Outer membrane protein beta-barrel domain-containing protein. | Membrane protein required for colicin V production. | 0.728 |
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