Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIS37842.1 | SIS38020.1 | SAMN05421766_101194 | SAMN05421766_101224 | Penicillin-binding protein 1A. | Polymer-forming protein. | 0.509 |
SIS37842.1 | SIS38343.1 | SAMN05421766_101194 | SAMN05421766_101270 | Penicillin-binding protein 1A. | Membrane-bound lytic murein transglycosylase D. | 0.640 |
SIS37842.1 | SIS40002.1 | SAMN05421766_101194 | SAMN05421766_101527 | Penicillin-binding protein 1A. | Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contain LysM domain. | 0.456 |
SIS38020.1 | SIS37842.1 | SAMN05421766_101224 | SAMN05421766_101194 | Polymer-forming protein. | Penicillin-binding protein 1A. | 0.509 |
SIS38020.1 | SIS40002.1 | SAMN05421766_101224 | SAMN05421766_101527 | Polymer-forming protein. | Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contain LysM domain. | 0.415 |
SIS38343.1 | SIS37842.1 | SAMN05421766_101270 | SAMN05421766_101194 | Membrane-bound lytic murein transglycosylase D. | Penicillin-binding protein 1A. | 0.640 |
SIS38343.1 | SIS39996.1 | SAMN05421766_101270 | SAMN05421766_101526 | Membrane-bound lytic murein transglycosylase D. | Hypothetical protein. | 0.507 |
SIS38343.1 | SIS40002.1 | SAMN05421766_101270 | SAMN05421766_101527 | Membrane-bound lytic murein transglycosylase D. | Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contain LysM domain. | 0.546 |
SIS39754.1 | SIS39996.1 | SAMN05421766_101491 | SAMN05421766_101526 | Membrane protein required for colicin V production. | Hypothetical protein. | 0.709 |
SIS39754.1 | SIS40002.1 | SAMN05421766_101491 | SAMN05421766_101527 | Membrane protein required for colicin V production. | Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contain LysM domain. | 0.477 |
SIS39980.1 | SIS39986.1 | SAMN05421766_101523 | SAMN05421766_101524 | Hypothetical protein. | Protein of unknown function. | 0.566 |
SIS39980.1 | SIS39990.1 | SAMN05421766_101523 | SAMN05421766_101525 | Hypothetical protein. | Tryptophan 2,3-dioxygenase apoenzyme. | 0.566 |
SIS39980.1 | SIS39996.1 | SAMN05421766_101523 | SAMN05421766_101526 | Hypothetical protein. | Hypothetical protein. | 0.566 |
SIS39980.1 | SIS40002.1 | SAMN05421766_101523 | SAMN05421766_101527 | Hypothetical protein. | Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contain LysM domain. | 0.499 |
SIS39986.1 | SIS39980.1 | SAMN05421766_101524 | SAMN05421766_101523 | Protein of unknown function. | Hypothetical protein. | 0.566 |
SIS39986.1 | SIS39990.1 | SAMN05421766_101524 | SAMN05421766_101525 | Protein of unknown function. | Tryptophan 2,3-dioxygenase apoenzyme. | 0.829 |
SIS39986.1 | SIS39996.1 | SAMN05421766_101524 | SAMN05421766_101526 | Protein of unknown function. | Hypothetical protein. | 0.774 |
SIS39986.1 | SIS40002.1 | SAMN05421766_101524 | SAMN05421766_101527 | Protein of unknown function. | Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contain LysM domain. | 0.676 |
SIS39986.1 | pgi | SAMN05421766_101524 | SAMN05421766_101528 | Protein of unknown function. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.620 |
SIS39990.1 | SIS39980.1 | SAMN05421766_101525 | SAMN05421766_101523 | Tryptophan 2,3-dioxygenase apoenzyme. | Hypothetical protein. | 0.566 |
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