Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIS37184.1 | SIS37188.1 | SAMN05421766_10157 | SAMN05421766_10158 | Zinc transporter, ZIP family. | Iron (metal) dependent repressor, DtxR family. | 0.861 |
SIS37184.1 | SIS37192.1 | SAMN05421766_10157 | SAMN05421766_10159 | Zinc transporter, ZIP family. | Outer membrane receptor for ferrienterochelin and colicins. | 0.551 |
SIS37184.1 | SIS37196.1 | SAMN05421766_10157 | SAMN05421766_10160 | Zinc transporter, ZIP family. | Lycopene beta-cyclase. | 0.439 |
SIS37188.1 | SIS37184.1 | SAMN05421766_10158 | SAMN05421766_10157 | Iron (metal) dependent repressor, DtxR family. | Zinc transporter, ZIP family. | 0.861 |
SIS37188.1 | SIS37192.1 | SAMN05421766_10158 | SAMN05421766_10159 | Iron (metal) dependent repressor, DtxR family. | Outer membrane receptor for ferrienterochelin and colicins. | 0.639 |
SIS37188.1 | SIS37196.1 | SAMN05421766_10158 | SAMN05421766_10160 | Iron (metal) dependent repressor, DtxR family. | Lycopene beta-cyclase. | 0.435 |
SIS37192.1 | SIS37184.1 | SAMN05421766_10159 | SAMN05421766_10157 | Outer membrane receptor for ferrienterochelin and colicins. | Zinc transporter, ZIP family. | 0.551 |
SIS37192.1 | SIS37188.1 | SAMN05421766_10159 | SAMN05421766_10158 | Outer membrane receptor for ferrienterochelin and colicins. | Iron (metal) dependent repressor, DtxR family. | 0.639 |
SIS37192.1 | SIS37196.1 | SAMN05421766_10159 | SAMN05421766_10160 | Outer membrane receptor for ferrienterochelin and colicins. | Lycopene beta-cyclase. | 0.594 |
SIS37196.1 | SIS37184.1 | SAMN05421766_10160 | SAMN05421766_10157 | Lycopene beta-cyclase. | Zinc transporter, ZIP family. | 0.439 |
SIS37196.1 | SIS37188.1 | SAMN05421766_10160 | SAMN05421766_10158 | Lycopene beta-cyclase. | Iron (metal) dependent repressor, DtxR family. | 0.435 |
SIS37196.1 | SIS37192.1 | SAMN05421766_10160 | SAMN05421766_10159 | Lycopene beta-cyclase. | Outer membrane receptor for ferrienterochelin and colicins. | 0.594 |
SIS37196.1 | SIS86250.1 | SAMN05421766_10160 | SAMN05421766_104457 | Lycopene beta-cyclase. | Outer membrane protein TolC. | 0.451 |
SIS37196.1 | SIS89879.1 | SAMN05421766_10160 | SAMN05421766_104733 | Lycopene beta-cyclase. | Beta-carotene 3-hydroxylase. | 0.913 |
SIS37196.1 | SIS89893.1 | SAMN05421766_10160 | SAMN05421766_104734 | Lycopene beta-cyclase. | Phytoene/squalene synthetase. | 0.504 |
SIS37196.1 | SIS89908.1 | SAMN05421766_10160 | SAMN05421766_104735 | Lycopene beta-cyclase. | Phytoene desaturase. | 0.942 |
SIS37196.1 | SIS89923.1 | SAMN05421766_10160 | SAMN05421766_104736 | Lycopene beta-cyclase. | B12 binding domain-containing protein. | 0.409 |
SIS37196.1 | SIS93009.1 | SAMN05421766_10160 | SAMN05421766_1052 | Lycopene beta-cyclase. | Electron transfer flavoprotein alpha subunit apoprotein. | 0.518 |
SIS37196.1 | SIS93029.1 | SAMN05421766_10160 | SAMN05421766_1053 | Lycopene beta-cyclase. | Electron transfer flavoprotein beta subunit. | 0.653 |
SIS86250.1 | SIS37196.1 | SAMN05421766_104457 | SAMN05421766_10160 | Outer membrane protein TolC. | Lycopene beta-cyclase. | 0.451 |
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