STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS41402.1PAS domain S-box-containing protein. (377 aa)    
Predicted Functional Partners:
SIS53805.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
 
0.953
SIS89966.1
PAS domain S-box-containing protein.
 
 
0.890
SIS74421.1
Response regulator receiver domain-containing protein.
  
  0.848
SIS41169.1
Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP.
 
  0.839
SIS69577.1
Pyruvate/2-oxoglutarate/acetoin dehydrogenase complex, dehydrogenase (E1) component.
    
 0.819
SIS70684.1
2-oxoisovalerate dehydrogenase E1 component.
    
 0.819
SIS39259.1
GAF domain-containing protein.
 
 
  0.788
SIS52885.1
cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases.
 0.756
SIS66034.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 
  0.744
SIS74625.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 
  0.736
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uglinosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, LMG:3809, NBRC 14962, Z. uliginosa, strain ZoBell 553
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.