Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIS38334.1 | SIS42115.1 | SAMN05421766_101269 | SAMN05421766_101799 | Protein of unknown function. | Rod shape determining protein RodA; Belongs to the SEDS family. | 0.749 |
SIS38334.1 | SIS42134.1 | SAMN05421766_101269 | SAMN05421766_101802 | Protein of unknown function. | Rod shape-determining protein MreC. | 0.674 |
SIS38334.1 | SIS42139.1 | SAMN05421766_101269 | SAMN05421766_101803 | Protein of unknown function. | Rod shape-determining protein MreB. | 0.491 |
SIS38334.1 | SIS94095.1 | SAMN05421766_101269 | SAMN05421766_10575 | Protein of unknown function. | Cell division protein FtsQ. | 0.905 |
SIS42115.1 | SIS38334.1 | SAMN05421766_101799 | SAMN05421766_101269 | Rod shape determining protein RodA; Belongs to the SEDS family. | Protein of unknown function. | 0.749 |
SIS42115.1 | SIS42121.1 | SAMN05421766_101799 | SAMN05421766_101800 | Rod shape determining protein RodA; Belongs to the SEDS family. | Penicillin-binding protein 2. | 0.989 |
SIS42115.1 | SIS42134.1 | SAMN05421766_101799 | SAMN05421766_101802 | Rod shape determining protein RodA; Belongs to the SEDS family. | Rod shape-determining protein MreC. | 0.850 |
SIS42115.1 | SIS42139.1 | SAMN05421766_101799 | SAMN05421766_101803 | Rod shape determining protein RodA; Belongs to the SEDS family. | Rod shape-determining protein MreB. | 0.918 |
SIS42115.1 | SIS93984.1 | SAMN05421766_101799 | SAMN05421766_10568 | Rod shape determining protein RodA; Belongs to the SEDS family. | Cell division protein FtsI (penicillin-binding protein 3). | 0.925 |
SIS42115.1 | SIS94095.1 | SAMN05421766_101799 | SAMN05421766_10575 | Rod shape determining protein RodA; Belongs to the SEDS family. | Cell division protein FtsQ. | 0.815 |
SIS42115.1 | mraY | SAMN05421766_101799 | SAMN05421766_10570 | Rod shape determining protein RodA; Belongs to the SEDS family. | Phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. | 0.839 |
SIS42115.1 | murC | SAMN05421766_101799 | SAMN05421766_10574 | Rod shape determining protein RodA; Belongs to the SEDS family. | UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.839 |
SIS42115.1 | murD | SAMN05421766_101799 | SAMN05421766_10571 | Rod shape determining protein RodA; Belongs to the SEDS family. | UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | 0.782 |
SIS42115.1 | murG | SAMN05421766_101799 | SAMN05421766_10573 | Rod shape determining protein RodA; Belongs to the SEDS family. | UDP-N-acetylglucosamine-N- acetylmuramylpentapeptide N-acetylglucosamine transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. | 0.803 |
SIS42121.1 | SIS42115.1 | SAMN05421766_101800 | SAMN05421766_101799 | Penicillin-binding protein 2. | Rod shape determining protein RodA; Belongs to the SEDS family. | 0.989 |
SIS42121.1 | SIS42134.1 | SAMN05421766_101800 | SAMN05421766_101802 | Penicillin-binding protein 2. | Rod shape-determining protein MreC. | 0.939 |
SIS42121.1 | SIS42139.1 | SAMN05421766_101800 | SAMN05421766_101803 | Penicillin-binding protein 2. | Rod shape-determining protein MreB. | 0.935 |
SIS42121.1 | SIS93984.1 | SAMN05421766_101800 | SAMN05421766_10568 | Penicillin-binding protein 2. | Cell division protein FtsI (penicillin-binding protein 3). | 0.903 |
SIS42121.1 | SIS94095.1 | SAMN05421766_101800 | SAMN05421766_10575 | Penicillin-binding protein 2. | Cell division protein FtsQ. | 0.902 |
SIS42121.1 | mraY | SAMN05421766_101800 | SAMN05421766_10570 | Penicillin-binding protein 2. | Phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. | 0.635 |
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