STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS48873.1Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family. (763 aa)    
Predicted Functional Partners:
SIS48900.1
FAD dependent oxidoreductase.
 
     0.818
SIS48883.1
Alpha-glucosidase.
 
     0.800
SIS48908.1
Transporter, SSS family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
     0.750
SIS48890.1
Hypothetical protein.
       0.736
SIS48857.1
Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family.
 
    
0.705
SIS48864.1
Uncharacterized sulfatase.
  
  0.693
SIS48849.1
Glycosyl hydrolases family 43.
 
    0.687
uxaC
D-glucuronate isomerase.
 
 
 0.684
xylA
D-xylose isomerase; Belongs to the xylose isomerase family.
    
 0.627
SIT03083.1
Aldose 1-epimerase.
   
 
  0.626
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uglinosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, LMG:3809, NBRC 14962, Z. uliginosa, strain ZoBell 553
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.