STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS49670.1Hypothetical protein. (266 aa)    
Predicted Functional Partners:
SIS41874.1
GTA TIM-barrel-like domain-containing protein.
  
     0.692
SIS49686.1
Molybdopterin synthase sulfur carrier subunit.
       0.615
SIS49697.1
Molybdopterin synthase subunit MoaE.
       0.607
SIS49655.1
RNA methyltransferase, TrmH family; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.
       0.573
SIS41809.1
Hypothetical protein.
  
     0.554
SIS41855.1
Pyridine nucleotide-disulphide oxidoreductase.
  
     0.532
SIS93190.1
Outer membrane protein beta-barrel family protein.
  
     0.500
SIS88018.1
Putative beta-barrel porin-2, OmpL-like. bbp2.
  
     0.481
SIS49791.1
Hypothetical protein.
 
     0.478
SIS93175.1
GLPGLI family protein.
  
     0.462
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uglinosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, LMG:3809, NBRC 14962, Z. uliginosa, strain ZoBell 553
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.