Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIS49896.1 | SIS49929.1 | SAMN05421766_102424 | SAMN05421766_102426 | Tetratricopeptide repeat-containing protein. | Hypothetical protein. | 0.630 |
SIS49896.1 | SIS49943.1 | SAMN05421766_102424 | SAMN05421766_102427 | Tetratricopeptide repeat-containing protein. | Protein of unknown function. | 0.687 |
SIS49896.1 | SIS54853.1 | SAMN05421766_102424 | SAMN05421766_102674 | Tetratricopeptide repeat-containing protein. | Protein of unknown function. | 0.722 |
SIS49896.1 | SIS64975.1 | SAMN05421766_102424 | SAMN05421766_103137 | Tetratricopeptide repeat-containing protein. | CarboxypepD_reg-like domain-containing protein. | 0.691 |
SIS49896.1 | SIS87373.1 | SAMN05421766_102424 | SAMN05421766_104540 | Tetratricopeptide repeat-containing protein. | Outer membrane protein transport protein (OMPP1/FadL/TodX). | 0.698 |
SIS49896.1 | recF | SAMN05421766_102424 | SAMN05421766_102425 | Tetratricopeptide repeat-containing protein. | DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family. | 0.603 |
SIS49896.1 | ribH | SAMN05421766_102424 | SAMN05421766_102423 | Tetratricopeptide repeat-containing protein. | 6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin. | 0.841 |
SIS49929.1 | SIS49896.1 | SAMN05421766_102426 | SAMN05421766_102424 | Hypothetical protein. | Tetratricopeptide repeat-containing protein. | 0.630 |
SIS49929.1 | SIS49943.1 | SAMN05421766_102426 | SAMN05421766_102427 | Hypothetical protein. | Protein of unknown function. | 0.854 |
SIS49929.1 | SIS64975.1 | SAMN05421766_102426 | SAMN05421766_103137 | Hypothetical protein. | CarboxypepD_reg-like domain-containing protein. | 0.605 |
SIS49929.1 | SIS87373.1 | SAMN05421766_102426 | SAMN05421766_104540 | Hypothetical protein. | Outer membrane protein transport protein (OMPP1/FadL/TodX). | 0.598 |
SIS49929.1 | recF | SAMN05421766_102426 | SAMN05421766_102425 | Hypothetical protein. | DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family. | 0.727 |
SIS49929.1 | ribH | SAMN05421766_102426 | SAMN05421766_102423 | Hypothetical protein. | 6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin. | 0.521 |
SIS49943.1 | SIS49896.1 | SAMN05421766_102427 | SAMN05421766_102424 | Protein of unknown function. | Tetratricopeptide repeat-containing protein. | 0.687 |
SIS49943.1 | SIS49929.1 | SAMN05421766_102427 | SAMN05421766_102426 | Protein of unknown function. | Hypothetical protein. | 0.854 |
SIS49943.1 | SIS54853.1 | SAMN05421766_102427 | SAMN05421766_102674 | Protein of unknown function. | Protein of unknown function. | 0.518 |
SIS49943.1 | SIS63378.1 | SAMN05421766_102427 | SAMN05421766_10338 | Protein of unknown function. | Protein of unknown function. | 0.605 |
SIS49943.1 | SIS64975.1 | SAMN05421766_102427 | SAMN05421766_103137 | Protein of unknown function. | CarboxypepD_reg-like domain-containing protein. | 0.527 |
SIS49943.1 | SIS87373.1 | SAMN05421766_102427 | SAMN05421766_104540 | Protein of unknown function. | Outer membrane protein transport protein (OMPP1/FadL/TodX). | 0.473 |
SIS49943.1 | SIS89784.1 | SAMN05421766_102427 | SAMN05421766_104726 | Protein of unknown function. | Hypothetical protein. | 0.527 |
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