STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS50649.1Family of unknown function. (1475 aa)    
Predicted Functional Partners:
SIS94516.1
Surface antigen.
 
   
 0.779
SIS56633.1
Putative MetA-pathway of phenol degradation.
  
     0.767
SIS38026.1
Protein involved in gliding motility SprE.
  
     0.766
SIS66478.1
Hypothetical protein.
  
    0.762
SIS98354.1
Hypothetical protein.
  
     0.758
SIS50022.1
Protein involved in gliding motility GldI.
 
     0.757
SIS99949.1
Protein of unknown function.
  
     0.756
SIS86977.1
TonB dependent receptor.
  
     0.755
SIS87373.1
Outer membrane protein transport protein (OMPP1/FadL/TodX).
  
   
 0.755
SIS41338.1
Hypothetical protein.
  
     0.754
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uglinosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, LMG:3809, NBRC 14962, Z. uliginosa, strain ZoBell 553
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.