Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIS42572.1 | SIS55762.1 | SAMN05421766_101863 | SAMN05421766_102721 | Heterodimeric methylmalonyl-CoA mutase large subunit precursor. | Catechol 2,3-dioxygenase. | 0.757 |
SIS46658.1 | SIS55762.1 | SAMN05421766_10237 | SAMN05421766_102721 | Hypothetical protein. | Catechol 2,3-dioxygenase. | 0.401 |
SIS55762.1 | SIS42572.1 | SAMN05421766_102721 | SAMN05421766_101863 | Catechol 2,3-dioxygenase. | Heterodimeric methylmalonyl-CoA mutase large subunit precursor. | 0.757 |
SIS55762.1 | SIS46658.1 | SAMN05421766_102721 | SAMN05421766_10237 | Catechol 2,3-dioxygenase. | Hypothetical protein. | 0.401 |
SIS55762.1 | SIS55782.1 | SAMN05421766_102721 | SAMN05421766_102722 | Catechol 2,3-dioxygenase. | Protein N-acetyltransferase, RimJ/RimL family. | 0.783 |
SIS55762.1 | SIS55812.1 | SAMN05421766_102721 | SAMN05421766_102723 | Catechol 2,3-dioxygenase. | Predicted esterase. | 0.787 |
SIS55762.1 | SIS55834.1 | SAMN05421766_102721 | SAMN05421766_102724 | Catechol 2,3-dioxygenase. | Uncharacterized domain 1-containing protein. | 0.559 |
SIS55762.1 | SIS55854.1 | SAMN05421766_102721 | SAMN05421766_102725 | Catechol 2,3-dioxygenase. | Isochorismate synthase. | 0.555 |
SIS55762.1 | SIS55893.1 | SAMN05421766_102721 | SAMN05421766_102727 | Catechol 2,3-dioxygenase. | Protein of unknown function. | 0.401 |
SIS55762.1 | SIS74826.1 | SAMN05421766_102721 | SAMN05421766_103796 | Catechol 2,3-dioxygenase. | 4Fe-4S dicluster domain-containing protein. | 0.543 |
SIS55762.1 | menD | SAMN05421766_102721 | SAMN05421766_102726 | Catechol 2,3-dioxygenase. | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily. | 0.450 |
SIS55782.1 | SIS55762.1 | SAMN05421766_102722 | SAMN05421766_102721 | Protein N-acetyltransferase, RimJ/RimL family. | Catechol 2,3-dioxygenase. | 0.783 |
SIS55782.1 | SIS55812.1 | SAMN05421766_102722 | SAMN05421766_102723 | Protein N-acetyltransferase, RimJ/RimL family. | Predicted esterase. | 0.785 |
SIS55782.1 | SIS55834.1 | SAMN05421766_102722 | SAMN05421766_102724 | Protein N-acetyltransferase, RimJ/RimL family. | Uncharacterized domain 1-containing protein. | 0.554 |
SIS55782.1 | SIS55854.1 | SAMN05421766_102722 | SAMN05421766_102725 | Protein N-acetyltransferase, RimJ/RimL family. | Isochorismate synthase. | 0.554 |
SIS55782.1 | SIS55893.1 | SAMN05421766_102722 | SAMN05421766_102727 | Protein N-acetyltransferase, RimJ/RimL family. | Protein of unknown function. | 0.401 |
SIS55782.1 | menD | SAMN05421766_102722 | SAMN05421766_102726 | Protein N-acetyltransferase, RimJ/RimL family. | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily. | 0.450 |
SIS55812.1 | SIS55762.1 | SAMN05421766_102723 | SAMN05421766_102721 | Predicted esterase. | Catechol 2,3-dioxygenase. | 0.787 |
SIS55812.1 | SIS55782.1 | SAMN05421766_102723 | SAMN05421766_102722 | Predicted esterase. | Protein N-acetyltransferase, RimJ/RimL family. | 0.785 |
SIS55812.1 | SIS55834.1 | SAMN05421766_102723 | SAMN05421766_102724 | Predicted esterase. | Uncharacterized domain 1-containing protein. | 0.610 |
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