STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS56703.1Glycosyltransferase Family 4. (423 aa)    
Predicted Functional Partners:
SIS56732.1
Membrane protein involved in the export of O-antigen and teichoic acid.
  
    0.860
SIS56681.1
Membrane protein YfhO.
 
     0.794
SIS63985.1
Trehalose 6-phosphate synthase /trehalose 6-phosphatase.
  
 0.740
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.597
SIT02087.1
Alpha-amylase.
   
 0.597
SIT15364.1
Glycogen recognition site of AMP-activated protein kinase.
   
 0.597
SIS56657.1
Protein of unknown function.
       0.554
SIS95456.1
Hypothetical protein.
  
     0.525
SIS56753.1
Hypothetical protein.
       0.503
SIS63798.1
Putative redox protein.
   
 
 0.503
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uglinosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, LMG:3809, NBRC 14962, Z. uliginosa, strain ZoBell 553
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.