Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIS62931.1 | SIS62976.1 | SAMN05421766_1039 | SAMN05421766_10312 | Xylulokinase. | Hypothetical protein. | 0.548 |
SIS62931.1 | tal | SAMN05421766_1039 | SAMN05421766_10311 | Xylulokinase. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily. | 0.824 |
SIS62931.1 | xylA | SAMN05421766_1039 | SAMN05421766_10310 | Xylulokinase. | D-xylose isomerase; Belongs to the xylose isomerase family. | 0.997 |
SIS62976.1 | SIS62931.1 | SAMN05421766_10312 | SAMN05421766_1039 | Hypothetical protein. | Xylulokinase. | 0.548 |
SIS62976.1 | SIS62991.1 | SAMN05421766_10312 | SAMN05421766_10313 | Hypothetical protein. | Signal transduction histidine kinase. | 0.474 |
SIS62976.1 | SIS75111.1 | SAMN05421766_10312 | SAMN05421766_103819 | Hypothetical protein. | Sugar phosphate isomerase/epimerase. | 0.484 |
SIS62976.1 | SIS89330.1 | SAMN05421766_10312 | SAMN05421766_104689 | Hypothetical protein. | Sugar phosphate isomerase/epimerase. | 0.518 |
SIS62976.1 | SIT09896.1 | SAMN05421766_10312 | SAMN05421766_11014 | Hypothetical protein. | Predicted dehydrogenase. | 0.408 |
SIS62976.1 | SIT10832.1 | SAMN05421766_10312 | SAMN05421766_11063 | Hypothetical protein. | Predicted dehydrogenase. | 0.408 |
SIS62976.1 | tal | SAMN05421766_10312 | SAMN05421766_10311 | Hypothetical protein. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily. | 0.475 |
SIS62976.1 | xylA | SAMN05421766_10312 | SAMN05421766_10310 | Hypothetical protein. | D-xylose isomerase; Belongs to the xylose isomerase family. | 0.582 |
SIS62991.1 | SIS62976.1 | SAMN05421766_10313 | SAMN05421766_10312 | Signal transduction histidine kinase. | Hypothetical protein. | 0.474 |
SIS75111.1 | SIS62976.1 | SAMN05421766_103819 | SAMN05421766_10312 | Sugar phosphate isomerase/epimerase. | Hypothetical protein. | 0.484 |
SIS75111.1 | SIT09896.1 | SAMN05421766_103819 | SAMN05421766_11014 | Sugar phosphate isomerase/epimerase. | Predicted dehydrogenase. | 0.486 |
SIS75111.1 | SIT10832.1 | SAMN05421766_103819 | SAMN05421766_11063 | Sugar phosphate isomerase/epimerase. | Predicted dehydrogenase. | 0.485 |
SIS89330.1 | SIS62976.1 | SAMN05421766_104689 | SAMN05421766_10312 | Sugar phosphate isomerase/epimerase. | Hypothetical protein. | 0.518 |
SIS89330.1 | SIT09896.1 | SAMN05421766_104689 | SAMN05421766_11014 | Sugar phosphate isomerase/epimerase. | Predicted dehydrogenase. | 0.479 |
SIS89330.1 | SIT10832.1 | SAMN05421766_104689 | SAMN05421766_11063 | Sugar phosphate isomerase/epimerase. | Predicted dehydrogenase. | 0.535 |
SIT09896.1 | SIS62976.1 | SAMN05421766_11014 | SAMN05421766_10312 | Predicted dehydrogenase. | Hypothetical protein. | 0.408 |
SIT09896.1 | SIS75111.1 | SAMN05421766_11014 | SAMN05421766_103819 | Predicted dehydrogenase. | Sugar phosphate isomerase/epimerase. | 0.486 |
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