Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIS39893.1 | SIS65389.1 | SAMN05421766_101511 | SAMN05421766_103163 | Glutamate dehydrogenase (NADP+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Isocitrate dehydrogenase; Belongs to the monomeric-type IDH family. | 0.764 |
SIS39893.1 | SIS81799.1 | SAMN05421766_101511 | SAMN05421766_104133 | Glutamate dehydrogenase (NADP+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 2-oxoglutarate dehydrogenase E1 component. | 0.803 |
SIS39893.1 | SIS87128.1 | SAMN05421766_101511 | SAMN05421766_104523 | Glutamate dehydrogenase (NADP+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. | 0.797 |
SIS39893.1 | SIT14788.1 | SAMN05421766_101511 | SAMN05421766_11414 | Glutamate dehydrogenase (NADP+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Glutamate synthase (NADH) small subunit. | 0.878 |
SIS39893.1 | SIT14802.1 | SAMN05421766_101511 | SAMN05421766_11415 | Glutamate dehydrogenase (NADP+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Glutamate synthase (NADH) large subunit. | 0.999 |
SIS39893.1 | argH | SAMN05421766_101511 | SAMN05421766_101736 | Glutamate dehydrogenase (NADP+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Argininosuccinate lyase. | 0.416 |
SIS48797.1 | SIS65389.1 | SAMN05421766_102317 | SAMN05421766_103163 | Glutamate dehydrogenase (NAD(P)+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Isocitrate dehydrogenase; Belongs to the monomeric-type IDH family. | 0.764 |
SIS48797.1 | SIS81799.1 | SAMN05421766_102317 | SAMN05421766_104133 | Glutamate dehydrogenase (NAD(P)+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 2-oxoglutarate dehydrogenase E1 component. | 0.803 |
SIS48797.1 | SIS87128.1 | SAMN05421766_102317 | SAMN05421766_104523 | Glutamate dehydrogenase (NAD(P)+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. | 0.797 |
SIS48797.1 | SIT14788.1 | SAMN05421766_102317 | SAMN05421766_11414 | Glutamate dehydrogenase (NAD(P)+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Glutamate synthase (NADH) small subunit. | 0.878 |
SIS48797.1 | SIT14802.1 | SAMN05421766_102317 | SAMN05421766_11415 | Glutamate dehydrogenase (NAD(P)+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Glutamate synthase (NADH) large subunit. | 0.999 |
SIS48797.1 | argH | SAMN05421766_102317 | SAMN05421766_101736 | Glutamate dehydrogenase (NAD(P)+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Argininosuccinate lyase. | 0.416 |
SIS64886.1 | SIS65389.1 | SAMN05421766_103131 | SAMN05421766_103163 | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | Isocitrate dehydrogenase; Belongs to the monomeric-type IDH family. | 0.889 |
SIS64886.1 | SIS81799.1 | SAMN05421766_103131 | SAMN05421766_104133 | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 2-oxoglutarate dehydrogenase E1 component. | 0.885 |
SIS64886.1 | SIS87128.1 | SAMN05421766_103131 | SAMN05421766_104523 | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. | 0.894 |
SIS64886.1 | SIT14802.1 | SAMN05421766_103131 | SAMN05421766_11415 | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | Glutamate synthase (NADH) large subunit. | 0.441 |
SIS64886.1 | argH | SAMN05421766_103131 | SAMN05421766_101736 | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | Argininosuccinate lyase. | 0.886 |
SIS65389.1 | SIS39893.1 | SAMN05421766_103163 | SAMN05421766_101511 | Isocitrate dehydrogenase; Belongs to the monomeric-type IDH family. | Glutamate dehydrogenase (NADP+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.764 |
SIS65389.1 | SIS48797.1 | SAMN05421766_103163 | SAMN05421766_102317 | Isocitrate dehydrogenase; Belongs to the monomeric-type IDH family. | Glutamate dehydrogenase (NAD(P)+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.764 |
SIS65389.1 | SIS64886.1 | SAMN05421766_103163 | SAMN05421766_103131 | Isocitrate dehydrogenase; Belongs to the monomeric-type IDH family. | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.889 |
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