Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIS37319.1 | SIS68036.1 | SAMN05421766_10189 | SAMN05421766_103336 | Choline dehydrogenase. | Protein of unknown function. | 0.640 |
SIS37319.1 | SIS84913.1 | SAMN05421766_10189 | SAMN05421766_104362 | Choline dehydrogenase. | Protein of unknown function. | 0.476 |
SIS37319.1 | SIS98980.1 | SAMN05421766_10189 | SAMN05421766_106129 | Choline dehydrogenase. | Hydroxypyruvate isomerase. | 0.452 |
SIS37363.1 | SIS68036.1 | SAMN05421766_10198 | SAMN05421766_103336 | Choline dehydrogenase. | Protein of unknown function. | 0.654 |
SIS37363.1 | SIS84913.1 | SAMN05421766_10198 | SAMN05421766_104362 | Choline dehydrogenase. | Protein of unknown function. | 0.498 |
SIS37363.1 | SIS98980.1 | SAMN05421766_10198 | SAMN05421766_106129 | Choline dehydrogenase. | Hydroxypyruvate isomerase. | 0.469 |
SIS40030.1 | SIS68036.1 | SAMN05421766_101531 | SAMN05421766_103336 | Protein of unknown function. | Protein of unknown function. | 0.627 |
SIS40030.1 | SIS84913.1 | SAMN05421766_101531 | SAMN05421766_104362 | Protein of unknown function. | Protein of unknown function. | 0.976 |
SIS48532.1 | SIS68036.1 | SAMN05421766_102274 | SAMN05421766_103336 | Protein of unknown function. | Protein of unknown function. | 0.660 |
SIS48532.1 | efp | SAMN05421766_102274 | SAMN05421766_103412 | Protein of unknown function. | Translation elongation factor P (EF-P); Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | 0.789 |
SIS54654.1 | SIS68036.1 | SAMN05421766_102663 | SAMN05421766_103336 | Glucose/arabinose dehydrogenase, beta-propeller fold. | Protein of unknown function. | 0.691 |
SIS68036.1 | SIS37319.1 | SAMN05421766_103336 | SAMN05421766_10189 | Protein of unknown function. | Choline dehydrogenase. | 0.640 |
SIS68036.1 | SIS37363.1 | SAMN05421766_103336 | SAMN05421766_10198 | Protein of unknown function. | Choline dehydrogenase. | 0.654 |
SIS68036.1 | SIS40030.1 | SAMN05421766_103336 | SAMN05421766_101531 | Protein of unknown function. | Protein of unknown function. | 0.627 |
SIS68036.1 | SIS48532.1 | SAMN05421766_103336 | SAMN05421766_102274 | Protein of unknown function. | Protein of unknown function. | 0.660 |
SIS68036.1 | SIS54654.1 | SAMN05421766_103336 | SAMN05421766_102663 | Protein of unknown function. | Glucose/arabinose dehydrogenase, beta-propeller fold. | 0.691 |
SIS68036.1 | SIS80384.1 | SAMN05421766_103336 | SAMN05421766_10430 | Protein of unknown function. | Choline dehydrogenase. | 0.653 |
SIS68036.1 | SIS84913.1 | SAMN05421766_103336 | SAMN05421766_104362 | Protein of unknown function. | Protein of unknown function. | 0.704 |
SIS68036.1 | SIS98980.1 | SAMN05421766_103336 | SAMN05421766_106129 | Protein of unknown function. | Hydroxypyruvate isomerase. | 0.655 |
SIS68036.1 | SIT16110.1 | SAMN05421766_103336 | SAMN05421766_11712 | Protein of unknown function. | Azurin. | 0.784 |
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