STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS68989.1Hypothetical protein. (208 aa)    
Predicted Functional Partners:
SIT15347.1
2TM domain-containing protein.
  
     0.637
SIS74408.1
Hypothetical protein.
  
     0.636
SIS81871.1
Hypothetical protein.
  
     0.631
SIS56633.1
Putative MetA-pathway of phenol degradation.
  
     0.629
SIS40816.1
Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase.
  
     0.628
SIS63361.1
Hypothetical protein.
  
     0.624
SIS66478.1
Hypothetical protein.
  
     0.619
SIS68833.1
Hypothetical protein.
  
     0.607
SIS82234.1
Sporulation related domain-containing protein.
  
     0.605
SIS93448.1
Putative auto-transporter adhesin, head GIN domain.
  
     0.589
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uglinosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, LMG:3809, NBRC 14962, Z. uliginosa, strain ZoBell 553
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