Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIS37678.1 | SIS63922.1 | SAMN05421766_101164 | SAMN05421766_10371 | Protein of unknown function. | Peptidase family M1. | 0.603 |
SIS63922.1 | SIS37678.1 | SAMN05421766_10371 | SAMN05421766_101164 | Peptidase family M1. | Protein of unknown function. | 0.603 |
SIS63922.1 | SIS63937.1 | SAMN05421766_10371 | SAMN05421766_10372 | Peptidase family M1. | ATP-dependent RNA helicase RhlE. | 0.584 |
SIS63922.1 | SIS63985.1 | SAMN05421766_10371 | SAMN05421766_10375 | Peptidase family M1. | Trehalose 6-phosphate synthase /trehalose 6-phosphatase. | 0.402 |
SIS63922.1 | SIS88670.1 | SAMN05421766_10371 | SAMN05421766_104636 | Peptidase family M1. | Aminopeptidase N. | 0.447 |
SIS63922.1 | SIS95003.1 | SAMN05421766_10371 | SAMN05421766_105141 | Peptidase family M1. | Hypothetical protein. | 0.429 |
SIS63922.1 | SIS95014.1 | SAMN05421766_10371 | SAMN05421766_105142 | Peptidase family M1. | Peptidase family M1. | 0.414 |
SIS63922.1 | glyA | SAMN05421766_10371 | SAMN05421766_103219 | Peptidase family M1. | Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.444 |
SIS63937.1 | SIS63922.1 | SAMN05421766_10372 | SAMN05421766_10371 | ATP-dependent RNA helicase RhlE. | Peptidase family M1. | 0.584 |
SIS63937.1 | SIS63985.1 | SAMN05421766_10372 | SAMN05421766_10375 | ATP-dependent RNA helicase RhlE. | Trehalose 6-phosphate synthase /trehalose 6-phosphatase. | 0.569 |
SIS63985.1 | SIS63922.1 | SAMN05421766_10375 | SAMN05421766_10371 | Trehalose 6-phosphate synthase /trehalose 6-phosphatase. | Peptidase family M1. | 0.402 |
SIS63985.1 | SIS63937.1 | SAMN05421766_10375 | SAMN05421766_10372 | Trehalose 6-phosphate synthase /trehalose 6-phosphatase. | ATP-dependent RNA helicase RhlE. | 0.569 |
SIS88670.1 | SIS63922.1 | SAMN05421766_104636 | SAMN05421766_10371 | Aminopeptidase N. | Peptidase family M1. | 0.447 |
SIS88670.1 | glyA | SAMN05421766_104636 | SAMN05421766_103219 | Aminopeptidase N. | Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.880 |
SIS95003.1 | SIS63922.1 | SAMN05421766_105141 | SAMN05421766_10371 | Hypothetical protein. | Peptidase family M1. | 0.429 |
SIS95003.1 | SIS95014.1 | SAMN05421766_105141 | SAMN05421766_105142 | Hypothetical protein. | Peptidase family M1. | 0.874 |
SIS95014.1 | SIS63922.1 | SAMN05421766_105142 | SAMN05421766_10371 | Peptidase family M1. | Peptidase family M1. | 0.414 |
SIS95014.1 | SIS95003.1 | SAMN05421766_105142 | SAMN05421766_105141 | Peptidase family M1. | Hypothetical protein. | 0.874 |
glyA | SIS63922.1 | SAMN05421766_103219 | SAMN05421766_10371 | Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | Peptidase family M1. | 0.444 |
glyA | SIS88670.1 | SAMN05421766_103219 | SAMN05421766_104636 | Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | Aminopeptidase N. | 0.880 |