Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIS70933.1 | SIS75196.1 | SAMN05421766_103527 | SAMN05421766_103825 | Uncharacterized conserved protein, DUF1778 family. | Ribosomal protein S18 acetylase RimI. | 0.643 |
SIS75184.1 | SIS75196.1 | SAMN05421766_103824 | SAMN05421766_103825 | Hypothetical protein. | Ribosomal protein S18 acetylase RimI. | 0.462 |
SIS75196.1 | SIS70933.1 | SAMN05421766_103825 | SAMN05421766_103527 | Ribosomal protein S18 acetylase RimI. | Uncharacterized conserved protein, DUF1778 family. | 0.643 |
SIS75196.1 | SIS75184.1 | SAMN05421766_103825 | SAMN05421766_103824 | Ribosomal protein S18 acetylase RimI. | Hypothetical protein. | 0.462 |
SIS75196.1 | SIS75203.1 | SAMN05421766_103825 | SAMN05421766_103826 | Ribosomal protein S18 acetylase RimI. | Stress responsive A/B Barrel Domain. | 0.539 |
SIS75196.1 | SIS75218.1 | SAMN05421766_103825 | SAMN05421766_103827 | Ribosomal protein S18 acetylase RimI. | Uncharacterized conserved protein GlcG, DUF336 family. | 0.522 |
SIS75203.1 | SIS75196.1 | SAMN05421766_103826 | SAMN05421766_103825 | Stress responsive A/B Barrel Domain. | Ribosomal protein S18 acetylase RimI. | 0.539 |
SIS75203.1 | SIS75218.1 | SAMN05421766_103826 | SAMN05421766_103827 | Stress responsive A/B Barrel Domain. | Uncharacterized conserved protein GlcG, DUF336 family. | 0.823 |
SIS75218.1 | SIS75196.1 | SAMN05421766_103827 | SAMN05421766_103825 | Uncharacterized conserved protein GlcG, DUF336 family. | Ribosomal protein S18 acetylase RimI. | 0.522 |
SIS75218.1 | SIS75203.1 | SAMN05421766_103827 | SAMN05421766_103826 | Uncharacterized conserved protein GlcG, DUF336 family. | Stress responsive A/B Barrel Domain. | 0.823 |