Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIS39990.1 | SIS81349.1 | SAMN05421766_101525 | SAMN05421766_104101 | Tryptophan 2,3-dioxygenase apoenzyme. | Kynurenine formamidase. | 0.939 |
SIS39990.1 | kmo | SAMN05421766_101525 | SAMN05421766_105153 | Tryptophan 2,3-dioxygenase apoenzyme. | Kynurenine 3-monooxygenase; Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid; Belongs to the aromatic-ring hydroxylase family. KMO subfamily. | 0.755 |
SIS39990.1 | kynU | SAMN05421766_101525 | SAMN05421766_105147 | Tryptophan 2,3-dioxygenase apoenzyme. | Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively. | 0.971 |
SIS81349.1 | SIS39990.1 | SAMN05421766_104101 | SAMN05421766_101525 | Kynurenine formamidase. | Tryptophan 2,3-dioxygenase apoenzyme. | 0.939 |
SIS81349.1 | SIS81360.1 | SAMN05421766_104101 | SAMN05421766_104102 | Kynurenine formamidase. | Protein of unknown function. | 0.805 |
SIS81349.1 | SIS81376.1 | SAMN05421766_104101 | SAMN05421766_104103 | Kynurenine formamidase. | Protein of unknown function. | 0.830 |
SIS81349.1 | SIS81389.1 | SAMN05421766_104101 | SAMN05421766_104104 | Kynurenine formamidase. | Stress responsive A/B Barrel Domain. | 0.707 |
SIS81349.1 | SIS81402.1 | SAMN05421766_104101 | SAMN05421766_104105 | Kynurenine formamidase. | Ribosomal protein S18 acetylase RimI. | 0.691 |
SIS81349.1 | SIS81417.1 | SAMN05421766_104101 | SAMN05421766_104106 | Kynurenine formamidase. | Predicted DNA-binding protein, MmcQ/YjbR family. | 0.738 |
SIS81349.1 | SIS82262.1 | SAMN05421766_104101 | SAMN05421766_104169 | Kynurenine formamidase. | Quinol:cytochrome c oxidoreductase iron-sulfur protein precursor. | 0.754 |
SIS81349.1 | SIT03410.1 | SAMN05421766_104101 | SAMN05421766_107135 | Kynurenine formamidase. | Tryptophan 2,3-dioxygenase. | 0.945 |
SIS81349.1 | kmo | SAMN05421766_104101 | SAMN05421766_105153 | Kynurenine formamidase. | Kynurenine 3-monooxygenase; Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid; Belongs to the aromatic-ring hydroxylase family. KMO subfamily. | 0.932 |
SIS81349.1 | kynU | SAMN05421766_104101 | SAMN05421766_105147 | Kynurenine formamidase. | Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively. | 0.980 |
SIS81360.1 | SIS81349.1 | SAMN05421766_104102 | SAMN05421766_104101 | Protein of unknown function. | Kynurenine formamidase. | 0.805 |
SIS81360.1 | SIS81376.1 | SAMN05421766_104102 | SAMN05421766_104103 | Protein of unknown function. | Protein of unknown function. | 0.804 |
SIS81360.1 | SIS81389.1 | SAMN05421766_104102 | SAMN05421766_104104 | Protein of unknown function. | Stress responsive A/B Barrel Domain. | 0.700 |
SIS81360.1 | SIS81402.1 | SAMN05421766_104102 | SAMN05421766_104105 | Protein of unknown function. | Ribosomal protein S18 acetylase RimI. | 0.691 |
SIS81360.1 | SIS81417.1 | SAMN05421766_104102 | SAMN05421766_104106 | Protein of unknown function. | Predicted DNA-binding protein, MmcQ/YjbR family. | 0.718 |
SIS81376.1 | SIS81349.1 | SAMN05421766_104103 | SAMN05421766_104101 | Protein of unknown function. | Kynurenine formamidase. | 0.830 |
SIS81376.1 | SIS81360.1 | SAMN05421766_104103 | SAMN05421766_104102 | Protein of unknown function. | Protein of unknown function. | 0.804 |
page 1 of 3