Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIS86420.1 | SIS86432.1 | SAMN05421766_104471 | SAMN05421766_104472 | TonB-linked outer membrane protein, SusC/RagA family. | Starch-binding associating with outer membrane. | 0.941 |
SIS86420.1 | SIS86444.1 | SAMN05421766_104471 | SAMN05421766_104473 | TonB-linked outer membrane protein, SusC/RagA family. | Copper-binding protein (NosD). | 0.516 |
SIS86420.1 | SIS86467.1 | SAMN05421766_104471 | SAMN05421766_104474 | TonB-linked outer membrane protein, SusC/RagA family. | Hypothetical protein. | 0.478 |
SIS86432.1 | SIS86420.1 | SAMN05421766_104472 | SAMN05421766_104471 | Starch-binding associating with outer membrane. | TonB-linked outer membrane protein, SusC/RagA family. | 0.941 |
SIS86432.1 | SIS86444.1 | SAMN05421766_104472 | SAMN05421766_104473 | Starch-binding associating with outer membrane. | Copper-binding protein (NosD). | 0.529 |
SIS86432.1 | SIS86467.1 | SAMN05421766_104472 | SAMN05421766_104474 | Starch-binding associating with outer membrane. | Hypothetical protein. | 0.490 |
SIS86444.1 | SIS86420.1 | SAMN05421766_104473 | SAMN05421766_104471 | Copper-binding protein (NosD). | TonB-linked outer membrane protein, SusC/RagA family. | 0.516 |
SIS86444.1 | SIS86432.1 | SAMN05421766_104473 | SAMN05421766_104472 | Copper-binding protein (NosD). | Starch-binding associating with outer membrane. | 0.529 |
SIS86444.1 | SIS86467.1 | SAMN05421766_104473 | SAMN05421766_104474 | Copper-binding protein (NosD). | Hypothetical protein. | 0.709 |
SIS86444.1 | SIS86479.1 | SAMN05421766_104473 | SAMN05421766_104475 | Copper-binding protein (NosD). | Glucokinase. | 0.475 |
SIS86444.1 | SIS86497.1 | SAMN05421766_104473 | SAMN05421766_104476 | Copper-binding protein (NosD). | MFS transporter, sugar porter (SP) family; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. | 0.443 |
SIS86444.1 | SIS86511.1 | SAMN05421766_104473 | SAMN05421766_104477 | Copper-binding protein (NosD). | Mannose-6-phosphate isomerase, class I. | 0.443 |
SIS86444.1 | SIS86522.1 | SAMN05421766_104473 | SAMN05421766_104478 | Copper-binding protein (NosD). | Glucose-6-phosphate isomerase. | 0.443 |
SIS86467.1 | SIS86420.1 | SAMN05421766_104474 | SAMN05421766_104471 | Hypothetical protein. | TonB-linked outer membrane protein, SusC/RagA family. | 0.478 |
SIS86467.1 | SIS86432.1 | SAMN05421766_104474 | SAMN05421766_104472 | Hypothetical protein. | Starch-binding associating with outer membrane. | 0.490 |
SIS86467.1 | SIS86444.1 | SAMN05421766_104474 | SAMN05421766_104473 | Hypothetical protein. | Copper-binding protein (NosD). | 0.709 |
SIS86467.1 | SIS86479.1 | SAMN05421766_104474 | SAMN05421766_104475 | Hypothetical protein. | Glucokinase. | 0.512 |
SIS86467.1 | SIS86497.1 | SAMN05421766_104474 | SAMN05421766_104476 | Hypothetical protein. | MFS transporter, sugar porter (SP) family; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. | 0.477 |
SIS86467.1 | SIS86511.1 | SAMN05421766_104474 | SAMN05421766_104477 | Hypothetical protein. | Mannose-6-phosphate isomerase, class I. | 0.477 |
SIS86467.1 | SIS86522.1 | SAMN05421766_104474 | SAMN05421766_104478 | Hypothetical protein. | Glucose-6-phosphate isomerase. | 0.477 |
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