STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS89175.1PAS domain S-box-containing protein. (362 aa)    
Predicted Functional Partners:
SIS89188.1
Response regulator receiver domain-containing protein.
 
 
 0.944
SIS64499.1
His Kinase A (phospho-acceptor) domain-containing protein.
 
 0.917
SIS52866.1
PAS domain S-box-containing protein.
 
 
0.892
SIS95193.1
Signal transduction histidine kinase.
 
0.857
SIS53805.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
 
  
0.848
SIS71846.1
Signal transduction histidine kinase.
  
 
  0.827
SIT08861.1
Signal transduction histidine kinase.
 
 0.763
SIS89990.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
     0.755
SIT08569.1
Signal transduction histidine kinase.
 
 0.753
SIS42857.1
Response regulator receiver domain-containing protein.
 
 
 0.743
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uglinosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, LMG:3809, NBRC 14962, Z. uliginosa, strain ZoBell 553
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.