Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIS37748.1 | SIS89737.1 | SAMN05421766_101178 | SAMN05421766_104722 | Exodeoxyribonuclease-3. | Ribosomal large subunit pseudouridine synthase F; Belongs to the pseudouridine synthase RsuA family. | 0.617 |
SIS40145.1 | SIS89737.1 | SAMN05421766_101548 | SAMN05421766_104722 | Exodeoxyribonuclease-3. | Ribosomal large subunit pseudouridine synthase F; Belongs to the pseudouridine synthase RsuA family. | 0.617 |
SIS89723.1 | SIS89737.1 | SAMN05421766_104721 | SAMN05421766_104722 | CarboxypepD_reg-like domain-containing protein. | Ribosomal large subunit pseudouridine synthase F; Belongs to the pseudouridine synthase RsuA family. | 0.500 |
SIS89737.1 | SIS37748.1 | SAMN05421766_104722 | SAMN05421766_101178 | Ribosomal large subunit pseudouridine synthase F; Belongs to the pseudouridine synthase RsuA family. | Exodeoxyribonuclease-3. | 0.617 |
SIS89737.1 | SIS40145.1 | SAMN05421766_104722 | SAMN05421766_101548 | Ribosomal large subunit pseudouridine synthase F; Belongs to the pseudouridine synthase RsuA family. | Exodeoxyribonuclease-3. | 0.617 |
SIS89737.1 | SIS89723.1 | SAMN05421766_104722 | SAMN05421766_104721 | Ribosomal large subunit pseudouridine synthase F; Belongs to the pseudouridine synthase RsuA family. | CarboxypepD_reg-like domain-containing protein. | 0.500 |
SIS89737.1 | SIS89749.1 | SAMN05421766_104722 | SAMN05421766_104723 | Ribosomal large subunit pseudouridine synthase F; Belongs to the pseudouridine synthase RsuA family. | Protein of unknown function. | 0.528 |
SIS89737.1 | SIS89760.1 | SAMN05421766_104722 | SAMN05421766_104724 | Ribosomal large subunit pseudouridine synthase F; Belongs to the pseudouridine synthase RsuA family. | Predicted membrane protein. | 0.528 |
SIS89737.1 | cmk | SAMN05421766_104722 | SAMN05421766_10683 | Ribosomal large subunit pseudouridine synthase F; Belongs to the pseudouridine synthase RsuA family. | Cytidylate kinase. | 0.786 |
SIS89737.1 | der | SAMN05421766_104722 | SAMN05421766_11248 | Ribosomal large subunit pseudouridine synthase F; Belongs to the pseudouridine synthase RsuA family. | GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.657 |
SIS89749.1 | SIS89737.1 | SAMN05421766_104723 | SAMN05421766_104722 | Protein of unknown function. | Ribosomal large subunit pseudouridine synthase F; Belongs to the pseudouridine synthase RsuA family. | 0.528 |
SIS89749.1 | SIS89760.1 | SAMN05421766_104723 | SAMN05421766_104724 | Protein of unknown function. | Predicted membrane protein. | 0.953 |
SIS89760.1 | SIS89737.1 | SAMN05421766_104724 | SAMN05421766_104722 | Predicted membrane protein. | Ribosomal large subunit pseudouridine synthase F; Belongs to the pseudouridine synthase RsuA family. | 0.528 |
SIS89760.1 | SIS89749.1 | SAMN05421766_104724 | SAMN05421766_104723 | Predicted membrane protein. | Protein of unknown function. | 0.953 |
cmk | SIS89737.1 | SAMN05421766_10683 | SAMN05421766_104722 | Cytidylate kinase. | Ribosomal large subunit pseudouridine synthase F; Belongs to the pseudouridine synthase RsuA family. | 0.786 |
cmk | der | SAMN05421766_10683 | SAMN05421766_11248 | Cytidylate kinase. | GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.986 |
der | SIS89737.1 | SAMN05421766_11248 | SAMN05421766_104722 | GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | Ribosomal large subunit pseudouridine synthase F; Belongs to the pseudouridine synthase RsuA family. | 0.657 |
der | cmk | SAMN05421766_11248 | SAMN05421766_10683 | GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | Cytidylate kinase. | 0.986 |