STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS81104.1cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. (211 aa)    
Predicted Functional Partners:
SIT14802.1
Glutamate synthase (NADH) large subunit.
    
 0.827
SIS81087.1
Cu+-exporting ATPase.
 
     0.744
SIT11882.1
Leucine rich repeat-containing protein.
    
 0.679
SIS41595.1
Hypothetical protein.
   
 0.564
aqpZ
Aquaporin Z; Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
  0.559
SIS89240.1
Glycerol uptake facilitator protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
  0.559
SIS81118.1
Nucleotide-binding universal stress protein, UspA family.
  
    0.546
SIS81047.1
Cytochrome c oxidase cbb3-type subunit I/II; Belongs to the heme-copper respiratory oxidase family.
 
  
 0.540
SIS43104.1
Transcriptional regulator, AraC family.
   
 0.496
SIS81018.1
Cytochrome c oxidase cbb3-type subunit 3.
 
     0.496
Your Current Organism:
Zobellia uliginosa
NCBI taxonomy Id: 143224
Other names: ACAM 538, ATCC 14397, Agarbacterium uliginosum, CCUG 33448, CECT 4277, CIP 104808, Cellulophaga uliginosa, Cytophaga uliginosa, DSM 2061, Flavibacterium uliginosum, Flavobacterium uglinosum, Flavobacterium uliginosum, IFO 14962, JCM 21152, LMG 3809, LMG:3809, NBRC 14962, Z. uliginosa, strain ZoBell 553
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.