Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIS38057.1 | SIS43245.1 | SAMN05421766_101230 | SAMN05421766_101949 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | P-hydroxybenzoate 3-monooxygenase. | 0.887 |
SIS38057.1 | SIS67351.1 | SAMN05421766_101230 | SAMN05421766_103286 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | Hypothetical protein; Belongs to the cytochrome P450 family. | 0.963 |
SIS38057.1 | SIS95356.1 | SAMN05421766_101230 | SAMN05421766_105171 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | Fatty acid hydroxylase superfamily protein. | 0.464 |
SIS38057.1 | SIT09741.1 | SAMN05421766_101230 | SAMN05421766_1103 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | Male sterility protein. | 0.607 |
SIS38057.1 | kmo | SAMN05421766_101230 | SAMN05421766_105153 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | Kynurenine 3-monooxygenase; Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid; Belongs to the aromatic-ring hydroxylase family. KMO subfamily. | 0.816 |
SIS43245.1 | SIS38057.1 | SAMN05421766_101949 | SAMN05421766_101230 | P-hydroxybenzoate 3-monooxygenase. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | 0.887 |
SIS43245.1 | SIS50587.1 | SAMN05421766_101949 | SAMN05421766_102464 | P-hydroxybenzoate 3-monooxygenase. | Protein of unknown function. | 0.584 |
SIS43245.1 | SIS67351.1 | SAMN05421766_101949 | SAMN05421766_103286 | P-hydroxybenzoate 3-monooxygenase. | Hypothetical protein; Belongs to the cytochrome P450 family. | 0.757 |
SIS43245.1 | SIS89893.1 | SAMN05421766_101949 | SAMN05421766_104734 | P-hydroxybenzoate 3-monooxygenase. | Phytoene/squalene synthetase. | 0.479 |
SIS43245.1 | SIS95356.1 | SAMN05421766_101949 | SAMN05421766_105171 | P-hydroxybenzoate 3-monooxygenase. | Fatty acid hydroxylase superfamily protein. | 0.621 |
SIS43245.1 | SIT09741.1 | SAMN05421766_101949 | SAMN05421766_1103 | P-hydroxybenzoate 3-monooxygenase. | Male sterility protein. | 0.403 |
SIS50587.1 | SIS43245.1 | SAMN05421766_102464 | SAMN05421766_101949 | Protein of unknown function. | P-hydroxybenzoate 3-monooxygenase. | 0.584 |
SIS50587.1 | SIS67351.1 | SAMN05421766_102464 | SAMN05421766_103286 | Protein of unknown function. | Hypothetical protein; Belongs to the cytochrome P450 family. | 0.783 |
SIS50587.1 | SIS89893.1 | SAMN05421766_102464 | SAMN05421766_104734 | Protein of unknown function. | Phytoene/squalene synthetase. | 0.700 |
SIS50587.1 | SIS95356.1 | SAMN05421766_102464 | SAMN05421766_105171 | Protein of unknown function. | Fatty acid hydroxylase superfamily protein. | 0.584 |
SIS50587.1 | SIT09741.1 | SAMN05421766_102464 | SAMN05421766_1103 | Protein of unknown function. | Male sterility protein. | 0.456 |
SIS50587.1 | SIT11948.1 | SAMN05421766_102464 | SAMN05421766_11145 | Protein of unknown function. | Hypothetical protein. | 0.816 |
SIS50587.1 | kmo | SAMN05421766_102464 | SAMN05421766_105153 | Protein of unknown function. | Kynurenine 3-monooxygenase; Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid; Belongs to the aromatic-ring hydroxylase family. KMO subfamily. | 0.584 |
SIS67351.1 | SIS38057.1 | SAMN05421766_103286 | SAMN05421766_101230 | Hypothetical protein; Belongs to the cytochrome P450 family. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | 0.963 |
SIS67351.1 | SIS43245.1 | SAMN05421766_103286 | SAMN05421766_101949 | Hypothetical protein; Belongs to the cytochrome P450 family. | P-hydroxybenzoate 3-monooxygenase. | 0.757 |
page 1 of 4