Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIS55834.1 | SIS99836.1 | SAMN05421766_102724 | SAMN05421766_106189 | Uncharacterized domain 1-containing protein. | Hypothetical protein. | 0.563 |
SIS63985.1 | SIS80587.1 | SAMN05421766_10375 | SAMN05421766_10445 | Trehalose 6-phosphate synthase /trehalose 6-phosphatase. | Nucleotidyl transferase. | 0.833 |
SIS63985.1 | SIS99836.1 | SAMN05421766_10375 | SAMN05421766_106189 | Trehalose 6-phosphate synthase /trehalose 6-phosphatase. | Hypothetical protein. | 0.506 |
SIS65700.1 | SIS99836.1 | SAMN05421766_103182 | SAMN05421766_106189 | Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | Hypothetical protein. | 0.854 |
SIS65700.1 | SIT06827.1 | SAMN05421766_103182 | SAMN05421766_108116 | Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | Riboflavin kinase / FMN adenylyltransferase; Belongs to the ribF family. | 0.704 |
SIS65700.1 | ribB | SAMN05421766_103182 | SAMN05421766_103342 | Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | 0.999 |
SIS70464.1 | SIS99836.1 | SAMN05421766_103496 | SAMN05421766_106189 | FAD/FMN-containing dehydrogenase. | Hypothetical protein. | 0.763 |
SIS80587.1 | SIS63985.1 | SAMN05421766_10445 | SAMN05421766_10375 | Nucleotidyl transferase. | Trehalose 6-phosphate synthase /trehalose 6-phosphatase. | 0.833 |
SIS80587.1 | SIS99836.1 | SAMN05421766_10445 | SAMN05421766_106189 | Nucleotidyl transferase. | Hypothetical protein. | 0.512 |
SIS80587.1 | ribB | SAMN05421766_10445 | SAMN05421766_103342 | Nucleotidyl transferase. | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | 0.420 |
SIS99807.1 | SIS99821.1 | SAMN05421766_106187 | SAMN05421766_106188 | S1/P1 Nuclease. | Penicillin-binding protein 1A. | 0.546 |
SIS99807.1 | SIS99836.1 | SAMN05421766_106187 | SAMN05421766_106189 | S1/P1 Nuclease. | Hypothetical protein. | 0.514 |
SIS99807.1 | SIS99877.1 | SAMN05421766_106187 | SAMN05421766_106190 | S1/P1 Nuclease. | Uncharacterized membrane protein. | 0.452 |
SIS99821.1 | SIS99807.1 | SAMN05421766_106188 | SAMN05421766_106187 | Penicillin-binding protein 1A. | S1/P1 Nuclease. | 0.546 |
SIS99821.1 | SIS99836.1 | SAMN05421766_106188 | SAMN05421766_106189 | Penicillin-binding protein 1A. | Hypothetical protein. | 0.691 |
SIS99821.1 | SIS99877.1 | SAMN05421766_106188 | SAMN05421766_106190 | Penicillin-binding protein 1A. | Uncharacterized membrane protein. | 0.593 |
SIS99836.1 | SIS55834.1 | SAMN05421766_106189 | SAMN05421766_102724 | Hypothetical protein. | Uncharacterized domain 1-containing protein. | 0.563 |
SIS99836.1 | SIS63985.1 | SAMN05421766_106189 | SAMN05421766_10375 | Hypothetical protein. | Trehalose 6-phosphate synthase /trehalose 6-phosphatase. | 0.506 |
SIS99836.1 | SIS65700.1 | SAMN05421766_106189 | SAMN05421766_103182 | Hypothetical protein. | Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.854 |
SIS99836.1 | SIS70464.1 | SAMN05421766_106189 | SAMN05421766_103496 | Hypothetical protein. | FAD/FMN-containing dehydrogenase. | 0.763 |
page 1 of 2