Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIS47118.1 | SIS54747.1 | SAMN05421766_10296 | SAMN05421766_102668 | HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes. | Putative transcriptional regulator; Belongs to the UPF0301 (AlgH) family. | 0.842 |
SIS47118.1 | SIT06081.1 | SAMN05421766_10296 | SAMN05421766_10870 | HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes. | Transcriptional regulator, GntR family. | 0.824 |
SIS47687.1 | SIT02685.1 | SAMN05421766_102160 | SAMN05421766_10786 | Starch-binding associating with outer membrane. | Signal transduction histidine kinase. | 0.576 |
SIS47687.1 | SIT06081.1 | SAMN05421766_102160 | SAMN05421766_10870 | Starch-binding associating with outer membrane. | Transcriptional regulator, GntR family. | 0.578 |
SIS47687.1 | SIT10670.1 | SAMN05421766_102160 | SAMN05421766_11053 | Starch-binding associating with outer membrane. | Sugar (pentulose or hexulose) kinase. | 0.424 |
SIS54747.1 | SIS47118.1 | SAMN05421766_102668 | SAMN05421766_10296 | Putative transcriptional regulator; Belongs to the UPF0301 (AlgH) family. | HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes. | 0.842 |
SIS54747.1 | SIT06081.1 | SAMN05421766_102668 | SAMN05421766_10870 | Putative transcriptional regulator; Belongs to the UPF0301 (AlgH) family. | Transcriptional regulator, GntR family. | 0.594 |
SIT02639.1 | SIT02662.1 | SAMN05421766_10782 | SAMN05421766_10784 | Starch-binding associating with outer membrane. | Starch-binding associating with outer membrane. | 0.752 |
SIT02639.1 | SIT02685.1 | SAMN05421766_10782 | SAMN05421766_10786 | Starch-binding associating with outer membrane. | Signal transduction histidine kinase. | 0.523 |
SIT02639.1 | SIT06081.1 | SAMN05421766_10782 | SAMN05421766_10870 | Starch-binding associating with outer membrane. | Transcriptional regulator, GntR family. | 0.587 |
SIT02662.1 | SIT02639.1 | SAMN05421766_10784 | SAMN05421766_10782 | Starch-binding associating with outer membrane. | Starch-binding associating with outer membrane. | 0.752 |
SIT02662.1 | SIT02685.1 | SAMN05421766_10784 | SAMN05421766_10786 | Starch-binding associating with outer membrane. | Signal transduction histidine kinase. | 0.566 |
SIT02662.1 | SIT06081.1 | SAMN05421766_10784 | SAMN05421766_10870 | Starch-binding associating with outer membrane. | Transcriptional regulator, GntR family. | 0.605 |
SIT02662.1 | SIT10670.1 | SAMN05421766_10784 | SAMN05421766_11053 | Starch-binding associating with outer membrane. | Sugar (pentulose or hexulose) kinase. | 0.490 |
SIT02685.1 | SIS47687.1 | SAMN05421766_10786 | SAMN05421766_102160 | Signal transduction histidine kinase. | Starch-binding associating with outer membrane. | 0.576 |
SIT02685.1 | SIT02639.1 | SAMN05421766_10786 | SAMN05421766_10782 | Signal transduction histidine kinase. | Starch-binding associating with outer membrane. | 0.523 |
SIT02685.1 | SIT02662.1 | SAMN05421766_10786 | SAMN05421766_10784 | Signal transduction histidine kinase. | Starch-binding associating with outer membrane. | 0.566 |
SIT02685.1 | SIT06081.1 | SAMN05421766_10786 | SAMN05421766_10870 | Signal transduction histidine kinase. | Transcriptional regulator, GntR family. | 0.554 |
SIT02685.1 | SIT14802.1 | SAMN05421766_10786 | SAMN05421766_11415 | Signal transduction histidine kinase. | Glutamate synthase (NADH) large subunit. | 0.774 |
SIT06081.1 | SIS47118.1 | SAMN05421766_10870 | SAMN05421766_10296 | Transcriptional regulator, GntR family. | HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes. | 0.824 |
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