Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIS36967.1 | SIT11533.1 | SAMN05421766_1011 | SAMN05421766_11114 | TonB-linked outer membrane protein, SusC/RagA family. | Starch-binding associating with outer membrane. | 0.764 |
SIS48619.1 | SIS49069.1 | SAMN05421766_102291 | SAMN05421766_102351 | TonB-linked outer membrane protein, SusC/RagA family. | Protein of unknown function. | 0.542 |
SIS48619.1 | SIS49096.1 | SAMN05421766_102291 | SAMN05421766_102354 | TonB-linked outer membrane protein, SusC/RagA family. | Sortilin, neurotensin receptor 3. | 0.511 |
SIS48619.1 | SIT11533.1 | SAMN05421766_102291 | SAMN05421766_11114 | TonB-linked outer membrane protein, SusC/RagA family. | Starch-binding associating with outer membrane. | 0.772 |
SIS48619.1 | SIT11606.1 | SAMN05421766_102291 | SAMN05421766_11119 | TonB-linked outer membrane protein, SusC/RagA family. | Hypothetical protein. | 0.526 |
SIS48619.1 | SIT14165.1 | SAMN05421766_102291 | SAMN05421766_11332 | TonB-linked outer membrane protein, SusC/RagA family. | Pectate lyase superfamily protein. | 0.408 |
SIS49069.1 | SIS48619.1 | SAMN05421766_102351 | SAMN05421766_102291 | Protein of unknown function. | TonB-linked outer membrane protein, SusC/RagA family. | 0.542 |
SIS49069.1 | SIS49096.1 | SAMN05421766_102351 | SAMN05421766_102354 | Protein of unknown function. | Sortilin, neurotensin receptor 3. | 0.896 |
SIS49069.1 | SIS49220.1 | SAMN05421766_102351 | SAMN05421766_102366 | Protein of unknown function. | TonB-linked outer membrane protein, SusC/RagA family. | 0.666 |
SIS49069.1 | SIT11516.1 | SAMN05421766_102351 | SAMN05421766_11112 | Protein of unknown function. | Right handed beta helix region. | 0.628 |
SIS49069.1 | SIT11525.1 | SAMN05421766_102351 | SAMN05421766_11113 | Protein of unknown function. | TonB-linked outer membrane protein, SusC/RagA family. | 0.557 |
SIS49069.1 | SIT11533.1 | SAMN05421766_102351 | SAMN05421766_11114 | Protein of unknown function. | Starch-binding associating with outer membrane. | 0.836 |
SIS49069.1 | SIT11555.1 | SAMN05421766_102351 | SAMN05421766_11116 | Protein of unknown function. | Beta-galactosidase. | 0.745 |
SIS49069.1 | SIT11606.1 | SAMN05421766_102351 | SAMN05421766_11119 | Protein of unknown function. | Hypothetical protein. | 0.731 |
SIS49069.1 | SIT14165.1 | SAMN05421766_102351 | SAMN05421766_11332 | Protein of unknown function. | Pectate lyase superfamily protein. | 0.753 |
SIS49096.1 | SIS48619.1 | SAMN05421766_102354 | SAMN05421766_102291 | Sortilin, neurotensin receptor 3. | TonB-linked outer membrane protein, SusC/RagA family. | 0.511 |
SIS49096.1 | SIS49069.1 | SAMN05421766_102354 | SAMN05421766_102351 | Sortilin, neurotensin receptor 3. | Protein of unknown function. | 0.896 |
SIS49096.1 | SIS49220.1 | SAMN05421766_102354 | SAMN05421766_102366 | Sortilin, neurotensin receptor 3. | TonB-linked outer membrane protein, SusC/RagA family. | 0.673 |
SIS49096.1 | SIT11516.1 | SAMN05421766_102354 | SAMN05421766_11112 | Sortilin, neurotensin receptor 3. | Right handed beta helix region. | 0.554 |
SIS49096.1 | SIT11525.1 | SAMN05421766_102354 | SAMN05421766_11113 | Sortilin, neurotensin receptor 3. | TonB-linked outer membrane protein, SusC/RagA family. | 0.586 |
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