Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIS46797.1 | SIS67161.1 | SAMN05421766_10256 | SAMN05421766_103271 | AraC-type DNA-binding protein. | Helix-turn-helix domain-containing protein. | 0.721 |
SIS46797.1 | SIS67534.1 | SAMN05421766_10256 | SAMN05421766_103300 | AraC-type DNA-binding protein. | AraC-type DNA-binding protein. | 0.748 |
SIS46797.1 | SIS86816.1 | SAMN05421766_10256 | SAMN05421766_104500 | AraC-type DNA-binding protein. | AraC-type DNA-binding protein. | 0.726 |
SIS46797.1 | SIT02409.1 | SAMN05421766_10256 | SAMN05421766_10771 | AraC-type DNA-binding protein. | Transcriptional regulator, AraC family. | 0.738 |
SIS46797.1 | SIT14648.1 | SAMN05421766_10256 | SAMN05421766_1144 | AraC-type DNA-binding protein. | AraC-type DNA-binding protein. | 0.633 |
SIS67161.1 | SIS46797.1 | SAMN05421766_103271 | SAMN05421766_10256 | Helix-turn-helix domain-containing protein. | AraC-type DNA-binding protein. | 0.721 |
SIS67161.1 | SIS67534.1 | SAMN05421766_103271 | SAMN05421766_103300 | Helix-turn-helix domain-containing protein. | AraC-type DNA-binding protein. | 0.737 |
SIS67161.1 | SIS86816.1 | SAMN05421766_103271 | SAMN05421766_104500 | Helix-turn-helix domain-containing protein. | AraC-type DNA-binding protein. | 0.707 |
SIS67161.1 | SIT14648.1 | SAMN05421766_103271 | SAMN05421766_1144 | Helix-turn-helix domain-containing protein. | AraC-type DNA-binding protein. | 0.565 |
SIS67534.1 | SIS46797.1 | SAMN05421766_103300 | SAMN05421766_10256 | AraC-type DNA-binding protein. | AraC-type DNA-binding protein. | 0.748 |
SIS67534.1 | SIS67161.1 | SAMN05421766_103300 | SAMN05421766_103271 | AraC-type DNA-binding protein. | Helix-turn-helix domain-containing protein. | 0.737 |
SIS67534.1 | SIS86816.1 | SAMN05421766_103300 | SAMN05421766_104500 | AraC-type DNA-binding protein. | AraC-type DNA-binding protein. | 0.755 |
SIS67534.1 | SIT14648.1 | SAMN05421766_103300 | SAMN05421766_1144 | AraC-type DNA-binding protein. | AraC-type DNA-binding protein. | 0.706 |
SIS82412.1 | SIT02409.1 | SAMN05421766_104181 | SAMN05421766_10771 | Allosteric NADP-dependent malic enzyme. | Transcriptional regulator, AraC family. | 0.766 |
SIS82412.1 | SIT14648.1 | SAMN05421766_104181 | SAMN05421766_1144 | Allosteric NADP-dependent malic enzyme. | AraC-type DNA-binding protein. | 0.766 |
SIS82412.1 | SIT14802.1 | SAMN05421766_104181 | SAMN05421766_11415 | Allosteric NADP-dependent malic enzyme. | Glutamate synthase (NADH) large subunit. | 0.621 |
SIS86816.1 | SIS46797.1 | SAMN05421766_104500 | SAMN05421766_10256 | AraC-type DNA-binding protein. | AraC-type DNA-binding protein. | 0.726 |
SIS86816.1 | SIS67161.1 | SAMN05421766_104500 | SAMN05421766_103271 | AraC-type DNA-binding protein. | Helix-turn-helix domain-containing protein. | 0.707 |
SIS86816.1 | SIS67534.1 | SAMN05421766_104500 | SAMN05421766_103300 | AraC-type DNA-binding protein. | AraC-type DNA-binding protein. | 0.755 |
SIS86816.1 | SIT14648.1 | SAMN05421766_104500 | SAMN05421766_1144 | AraC-type DNA-binding protein. | AraC-type DNA-binding protein. | 0.556 |
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