STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBOR_9808Uncharacterized protein. (669 aa)    
Predicted Functional Partners:
SBOR_7810
RanBD1 domain-containing protein.
    
 0.691
SBOR_3583
Amidase domain-containing protein.
    
 0.613
SBOR_0614
WD_REPEATS_REGION domain-containing protein.
    
 0.610
SBOR_9459
B30.2/SPRY domain-containing protein.
    
 0.606
SBOR_8313
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.586
SBOR_7265
Uncharacterized protein.
    
 0.584
SBOR_3339
Protein transport protein SEC13; Belongs to the WD repeat SEC13 family.
    
 0.580
SBOR_9083
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
 0.573
SBOR_4952
Ubiquitin.
    
  0.556
SBOR_1525
Transcription elongation factor S-II.
    
  0.542
Your Current Organism:
Sclerotinia borealis
NCBI taxonomy Id: 1432307
Other names: S. borealis F-4128, Sclerotinia borealis F-4128
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.