STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBOR_8964Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy. (439 aa)    
Predicted Functional Partners:
SBOR_1069
Autophagy-related protein.
   
 0.994
SBOR_4456
Zn(2)-C6 fungal-type domain-containing protein.
   
 0.979
SBOR_7418
Protein kinase domain-containing protein.
   
 
 0.975
SBOR_1716
Protein kinase.
   
 
 0.935
SBOR_3518
Uncharacterized protein.
   
 
 0.922
SBOR_1244
Lipase_3 domain-containing protein.
   
 
 0.920
SBOR_8893
Autophagy-related protein 3.
   
 
 0.746
SBOR_4903
Protein-vacuolar targeting protein Atg18.
   
 
 0.742
SBOR_1089
Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for cytoplasm to vacuole transport (Cvt) and autophagy. Activates ATG12 for its conjugation with ATG5 and ATG8 for its conjugation with phosphatidylethanolamine. Both systems are needed for the ATG8 association to Cvt vesicles and autophagosomes membranes. Autophagy is essential for maintenance of amino acid levels and protein synthesis under nitrogen starvation. Required for selective autophagic degradation of the nucleus (nucleophagy) as well as for mitophagy wh [...]
   
 
 0.675
SBOR_4550
Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily.
   
 
 0.662
Your Current Organism:
Sclerotinia borealis
NCBI taxonomy Id: 1432307
Other names: S. borealis F-4128, Sclerotinia borealis F-4128
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