STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBOR_10141Uncharacterized protein. (214 aa)    
Predicted Functional Partners:
SBOR_6799
DNA repair family protein.
    
 0.655
SBOR_5149
Fe2OG dioxygenase domain-containing protein.
    
 0.655
SBOR_2914
Glycoside hydrolase family 13 protein.
    
 0.655
SBOR_7698
Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.
    
 
 0.624
SBOR_10103
3-phosphoshikimate 1-carboxyvinyltransferase; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis. In the 2nd section; belongs to the EPSP synthase family. In the 4th section; belongs to the type-I 3-dehydroquinase family. In the N-terminal section; belongs to the dehydroquinate synthase family.
    
 0.561
SBOR_4234
3-dehydroquinate synthase.
    
 0.561
SBOR_9192
Glucan 1,4-alpha-maltohexaosidase.
    
 0.549
SBOR_9442
Glycoside hydrolase family 13 protein.
    
 0.549
SBOR_5455
Aamy domain-containing protein.
    
 0.549
SBOR_6788
Aamy domain-containing protein.
    
 0.549
Your Current Organism:
Sclerotinia borealis
NCBI taxonomy Id: 1432307
Other names: S. borealis F-4128, Sclerotinia borealis F-4128
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