Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SBOR_10103 | SBOR_10141 | W9BY35 | W9C3H2 | 3-phosphoshikimate 1-carboxyvinyltransferase; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis. In the 2nd section; belongs to the EPSP synthase family. In the 4th section; belongs to the type-I 3-dehydroquinase family. In the N-terminal section; belongs to the dehydroquinate synthase family. | Uncharacterized protein. | 0.561 |
SBOR_10103 | SBOR_7698 | W9BY35 | W9CAL1 | 3-phosphoshikimate 1-carboxyvinyltransferase; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis. In the 2nd section; belongs to the EPSP synthase family. In the 4th section; belongs to the type-I 3-dehydroquinase family. In the N-terminal section; belongs to the dehydroquinate synthase family. | Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities. | 0.865 |
SBOR_10141 | SBOR_10103 | W9C3H2 | W9BY35 | Uncharacterized protein. | 3-phosphoshikimate 1-carboxyvinyltransferase; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis. In the 2nd section; belongs to the EPSP synthase family. In the 4th section; belongs to the type-I 3-dehydroquinase family. In the N-terminal section; belongs to the dehydroquinate synthase family. | 0.561 |
SBOR_10141 | SBOR_2914 | W9C3H2 | W9CPZ6 | Uncharacterized protein. | Glycoside hydrolase family 13 protein. | 0.655 |
SBOR_10141 | SBOR_4234 | W9C3H2 | W9CHG4 | Uncharacterized protein. | 3-dehydroquinate synthase. | 0.561 |
SBOR_10141 | SBOR_5149 | W9C3H2 | W9CEZ3 | Uncharacterized protein. | Fe2OG dioxygenase domain-containing protein. | 0.655 |
SBOR_10141 | SBOR_5455 | W9C3H2 | W9CBP3 | Uncharacterized protein. | Aamy domain-containing protein. | 0.549 |
SBOR_10141 | SBOR_6788 | W9C3H2 | W9CDG1 | Uncharacterized protein. | Aamy domain-containing protein. | 0.549 |
SBOR_10141 | SBOR_6799 | W9C3H2 | W9C7V2 | Uncharacterized protein. | DNA repair family protein. | 0.655 |
SBOR_10141 | SBOR_7698 | W9C3H2 | W9CAL1 | Uncharacterized protein. | Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities. | 0.624 |
SBOR_10141 | SBOR_9192 | W9C3H2 | W9C0V1 | Uncharacterized protein. | Glucan 1,4-alpha-maltohexaosidase. | 0.549 |
SBOR_10141 | SBOR_9442 | W9C3H2 | W9C363 | Uncharacterized protein. | Glycoside hydrolase family 13 protein. | 0.549 |
SBOR_2914 | SBOR_10141 | W9CPZ6 | W9C3H2 | Glycoside hydrolase family 13 protein. | Uncharacterized protein. | 0.655 |
SBOR_2914 | SBOR_6788 | W9CPZ6 | W9CDG1 | Glycoside hydrolase family 13 protein. | Aamy domain-containing protein. | 0.431 |
SBOR_2914 | SBOR_9192 | W9CPZ6 | W9C0V1 | Glycoside hydrolase family 13 protein. | Glucan 1,4-alpha-maltohexaosidase. | 0.686 |
SBOR_2914 | SBOR_9442 | W9CPZ6 | W9C363 | Glycoside hydrolase family 13 protein. | Glycoside hydrolase family 13 protein. | 0.559 |
SBOR_4234 | SBOR_10141 | W9CHG4 | W9C3H2 | 3-dehydroquinate synthase. | Uncharacterized protein. | 0.561 |
SBOR_4234 | SBOR_7698 | W9CHG4 | W9CAL1 | 3-dehydroquinate synthase. | Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities. | 0.865 |
SBOR_5149 | SBOR_10141 | W9CEZ3 | W9C3H2 | Fe2OG dioxygenase domain-containing protein. | Uncharacterized protein. | 0.655 |
SBOR_5149 | SBOR_9192 | W9CEZ3 | W9C0V1 | Fe2OG dioxygenase domain-containing protein. | Glucan 1,4-alpha-maltohexaosidase. | 0.520 |
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